Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C03
         (892 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g55800.1 68416.m06200 sedoheptulose-1,7-bisphosphatase, chlor...    31   0.78 
At4g34490.1 68417.m04903 cyclase-associated protein (cap1) ident...    30   2.4  
At1g44880.1 68414.m05142 Ulp1 protease family protein similar to...    29   3.1  
At5g38560.1 68418.m04662 protein kinase family protein contains ...    29   4.1  
At5g01420.1 68418.m00055 glutaredoxin family protein                   28   7.2  
At1g47660.1 68414.m05295 hypothetical protein                          28   9.6  
At1g45688.2 68414.m05201 expressed protein                             28   9.6  
At1g45688.1 68414.m05202 expressed protein                             28   9.6  
At1g12810.1 68414.m01488 proline-rich family protein contains pr...    28   9.6  

>At3g55800.1 68416.m06200 sedoheptulose-1,7-bisphosphatase,
           chloroplast / sedoheptulose-bisphosphatase identical to
           SP|P46283 Sedoheptulose-1,7-bisphosphatase, chloroplast
           precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase)
           (SBPASE) (SED(1,7)P2ASE) {Arabidopsis thaliana}
          Length = 393

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = -1

Query: 799 STPIFERRDPTGPIENGITXIVRPLMQPGNLSDTAFS*FRGGDVVPQGGLLAGASRGDHV 620
           S  + E +D  GP+E G +    PL    ++ DT F+      V P G  L G + GD V
Sbjct: 155 SEEVPELQDMGGPVEGGFSVAFDPL-DGSSIVDTNFTVGTIFGVWP-GDKLTGITGGDQV 212

Query: 619 ALPIGAY 599
           A  +G Y
Sbjct: 213 AAAMGIY 219


>At4g34490.1 68417.m04903 cyclase-associated protein (cap1)
           identical to cyclase-associated protein (cap1)
           GI:3169136 from [Arabidopsis thaliana]
          Length = 476

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 573 LPGLNP-ARSYAPIG---RATWSPRLAPARSPPWGTTSPPRNYEKAVSDR 710
           LPGL    +S+ P+G    A+  P  APA+ PP     PP     A S +
Sbjct: 202 LPGLREYVKSHYPLGPVWNASGKPASAPAKGPPGAPAPPPAPLFSAESSK 251


>At1g44880.1 68414.m05142 Ulp1 protease family protein similar to
           At5g28170, At1g35110, At3g42530, At4g19320, At5g36020,
           At4g03970, At3g43010, At2g10350; contains Pfam profile
           PF02902: Ulp1 protease family, C-terminal catalytic
           domain
          Length = 1038

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 657 ADFWPARAEGTTSLSRSEHMNVRDSTRATSAGSVRANQQLSYL 529
           +D  PAR  G  +LS +EHM V  S  +    +   NQ+ +++
Sbjct: 842 SDSSPARERGKPTLSEAEHMEVLVSLLSQKLATTLTNQRAAFV 884


>At5g38560.1 68418.m04662 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 681

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +3

Query: 528 PNTITVGWPGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPP 680
           P+T     P   +   P   P  S +P    T +P   P+ SPP  T SPP
Sbjct: 99  PSTPATTPPAPPQTVSPPPPPDASPSPPAPTTTNPPPKPSPSPPGETPSPP 149


>At5g01420.1 68418.m00055 glutaredoxin family protein
          Length = 401

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +2

Query: 524 LPKYDNCWLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPELREGSV 703
           LPK  N     T  A + R   ++       ++++ + R G++ A GN++   E     V
Sbjct: 37  LPKISNHIPQITSAASIWRTPQKSENQIANVTELLENVRQGEEEASGNFVGDEENVRPPV 96

Query: 704 RQIP 715
            QIP
Sbjct: 97  NQIP 100


>At1g47660.1 68414.m05295 hypothetical protein
          Length = 275

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = +3

Query: 603 APIGRATWSPRLAPARSPP-WGTTSPPRNYEKAV 701
           AP  R T  P   P   PP W TT PP     AV
Sbjct: 29  APPARPTTPPPARPTTPPPVWPTTPPPAGAPVAV 62


>At1g45688.2 68414.m05201 expressed protein
          Length = 248

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 627 SPRLAPARSPPWGTTSPPRNYEKAVSDRFPGCMRGRTMXVIP 752
           +P L+P  SPP   +S  R+  ++ S RF G ++  +  V P
Sbjct: 48  TPVLSPMGSPPHSHSSMGRHSRESSSSRFSGSLKPGSRKVNP 89


>At1g45688.1 68414.m05202 expressed protein
          Length = 342

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 627 SPRLAPARSPPWGTTSPPRNYEKAVSDRFPGCMRGRTMXVIP 752
           +P L+P  SPP   +S  R+  ++ S RF G ++  +  V P
Sbjct: 48  TPVLSPMGSPPHSHSSMGRHSRESSSSRFSGSLKPGSRKVNP 89


>At1g12810.1 68414.m01488 proline-rich family protein contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 129

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 588 PARSYAPIG-RATWSPRLAPARSPPWGTTSPPRNYE 692
           P  SY P G ++ + P   P+  PP G  SPP ++E
Sbjct: 7   PPESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHE 42


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,648,073
Number of Sequences: 28952
Number of extensions: 354890
Number of successful extensions: 1159
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)