Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C01
(869 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 81 2e-16
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 81 2e-16
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 73 7e-14
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 59 7e-10
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 55 2e-08
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 38 0.002
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 33 0.053
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.65
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.86
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 2.0
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.6
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.6
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 26 6.1
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 26 8.0
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.0
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 22 9.1
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 81.4 bits (192), Expect = 2e-16
Identities = 53/159 (33%), Positives = 76/159 (47%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 548
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 549 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPDVVEGRQQFYTED 728
R+D +++ KLW H + V A +L DL L++ D +LIH P + + + +D
Sbjct: 75 VPRKD-IWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKD 133
Query: 729 IISDPILGVRLHGRLVRHGRPRXRKXXXXSIGVSNFNST 845
+ I + IG+SNFN T
Sbjct: 134 KDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDT 172
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 81.0 bits (191), Expect = 2e-16
Identities = 47/111 (42%), Positives = 61/111 (54%)
Frame = +3
Query: 357 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 536
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 537 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
+ V R ++++ KLW HR LV A +L DL LE+ D +LIH P
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWP 119
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 72.5 bits (170), Expect = 7e-14
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Frame = +3
Query: 342 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 521
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 522 AIKNKIDDGTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
AI + + V+R ++F+ KL S ++ T A R SL LG + DLFLI +P
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSKLANCSDYYST---RAAIRSSLHHLG-TYIDLFLIQSP 117
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 59.3 bits (137), Expect = 7e-10
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Frame = +3
Query: 387 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 548
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 549 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
V R +LFI K+ H D + A SL LG ++ DL+L+H+P
Sbjct: 68 NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSP 111
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 54.8 bits (126), Expect = 2e-08
Identities = 32/109 (29%), Positives = 57/109 (52%)
Frame = +3
Query: 363 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 542
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 543 DGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
+ +R++++ KL + ++ S+ GL + DLFL+H+P
Sbjct: 66 ETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSP 113
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 37.5 bits (83), Expect = 0.002
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Frame = +3
Query: 432 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIKNKIDDGT---VRRDELFIMG-KLW 590
T ++ A D+G DTA IY N E ++GKAIK D + + F G KL
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLP 105
Query: 591 ST--FHRTDLVETACRISLADLGLEFFDLFLIHNPD 692
+T R ++E SL LGL + D+ + H PD
Sbjct: 106 NTTGLSRKHIIE-GLNASLKRLGLPYVDVIMAHRPD 140
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 33.1 bits (72), Expect = 0.053
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Frame = +3
Query: 441 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIKNKIDDGTVRRDELFIMGKLW------- 590
++ A D+G D++ +YG NE+ IG+ K T RR E+F+ K
Sbjct: 38 VLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQ-----TGRRKEIFLATKFGYEKNPET 92
Query: 591 ---STFHRTDLVETACRISLADLGLEFFDLFLIH 683
S + D +E A +SL LG++ DL+ +H
Sbjct: 93 GELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.65
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +3
Query: 336 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLI 515
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 516 GKAIKNKIDDGTVRRDEL 569
G+ + K +G RD+L
Sbjct: 425 GEGVLTKSKNGPSMRDQL 442
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.1 bits (62), Expect = 0.86
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -2
Query: 331 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQ 167
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQ 102
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 388 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 257
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 788 SSMPNQASM*SNSEYWITDDIFGIELLPSFNDIGIVDEEEVE 663
S+ PN+ S +N+E + D F +L S ++ I D+++ E
Sbjct: 497 STTPNELSKNANNENYDDDSSFYGKLAESVQEVSIADKKDAE 538
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 382 VPSRSFKVATSFTLPFSLASFSSAILV 302
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 460 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 314
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 649 WAWXXXXXXXXXIPMSLKEGNSSIPKISS--VIQYSEFDYMDAWFGMEDLV 795
W W I ++ G +IP I + V + +FDY+ A+FG+ LV
Sbjct: 204 WPWTYWTTAIVCIVFAII-GYFAIPHIEADEVEEKQKFDYLGAFFGVSGLV 253
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 619 RRPAGFHWQTWAWXXXXXXXXXIPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVX 798
R P + Q AW + +S N ++ +S + + DY WF E LV
Sbjct: 38 REPIIYDVQHSAWGLAVSPLRILGISSNSHNVNLFHLSPEFKRFKEDYHSPWFRQETLVL 97
Query: 799 E 801
E
Sbjct: 98 E 98
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 349 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 206
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 22.2 bits (45), Expect(2) = 9.1
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -2
Query: 466 PISIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFK 362
P+++ + +V + S VP+++ ++ PSR K
Sbjct: 131 PLAVNTADTTVSHSTSSSNVPRSLNKIHDPSRFIK 165
Score = 21.4 bits (43), Expect(2) = 9.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 628 QAVSTRSVRWNVLHNLPIMKSSSRLTVPSS 539
Q+ S +++W + I+K ++ VP+S
Sbjct: 75 QSSSLNNLKWKDVEGPNILKPIKKIAVPAS 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,241,488
Number of Sequences: 5004
Number of extensions: 64771
Number of successful extensions: 227
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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