Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C01
(869 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 6e-22
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 88 8e-18
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-10
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 58 9e-09
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 52 5e-07
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042) 29 3.7
SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6) 29 3.7
SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 4.9
SB_58937| Best HMM Match : Phytochelatin (HMM E-Value=5.6e-37) 28 8.6
SB_9539| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 101 bits (243), Expect = 6e-22
Identities = 61/163 (37%), Positives = 85/163 (52%)
Frame = +3
Query: 354 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 533
+AT+KL +G MPV+ LGT P V+ AI GYR ID AY Y NEK +G A++
Sbjct: 1 MATVKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALRE 60
Query: 534 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPDVVEGRQQ 713
+ V R +LFI KLW+T H V + C SL DLGL++ DL+LIH P +
Sbjct: 61 LL-GSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDE 119
Query: 714 FYTEDIISDPILGVRLHGRLVRHGRPRXRKXXXXSIGVSNFNS 842
F+ +D + + + + +IG+SNFNS
Sbjct: 120 FFPKDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNS 162
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 88.2 bits (209), Expect = 8e-18
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Frame = +3
Query: 444 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 623
V AI++GYR ID A IYGNE IG+A+ + +G V+R+ELF+ KLW H D V
Sbjct: 71 VRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDSHHPDDVLP 130
Query: 624 ACRISLADLGLEFFDLFLIHNPDVVEGRQQFYTEDIISDPILGVRLHG--RLVRHGRPRX 797
AC+ +L +L L++ DL+LIH P V ++ I++ I+G G +
Sbjct: 131 ACQATLKNLQLDYLDLYLIHIP--VAFKKGVRLPHSIAEGIIGYTPEGVQNTWQAMEGLV 188
Query: 798 RKXXXXSIGVSNFN 839
K +IGVSNF+
Sbjct: 189 AKGLCKAIGVSNFS 202
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +3
Query: 444 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 623
V A ++GYR ID A I+GNE G+A+ + G V+R+E G W + + V
Sbjct: 18 VRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE---CGSTWQS--SKEEVGN 69
Query: 624 ACRISLADLGLEFFD 668
A R+++ +LG D
Sbjct: 70 AVRLAI-ELGYRHID 83
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 61.7 bits (143), Expect = 8e-10
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +3
Query: 357 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYG-NEKLIGKAIKN 533
A + L G MPV+ GTA L T +V+TA++ GYR IDTA Y +E + KAI
Sbjct: 327 ADVLLASGYTMPVMGFGTATLGED-TLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA- 384
Query: 534 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHN 686
D G R+D +FI+ KL + + + +SL L ++ DLFLIH+
Sbjct: 385 --DSGIPRKD-IFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHS 432
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 58.0 bits (134), Expect = 9e-09
Identities = 37/111 (33%), Positives = 61/111 (54%)
Frame = +3
Query: 357 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 536
+T + DG +P++ LG + + + V A++ GYR IDTA Y NE+ +G+A++
Sbjct: 66 STRIMNDGRKIPLLGLGAHDIHSK---QAVLWALESGYRLIDTASRYHNEQSVGEAVR-- 120
Query: 537 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
+ R E++++ K++ T H A SL LGL + DL+LIH P
Sbjct: 121 --CSNIPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFP 169
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 52.4 bits (120), Expect = 5e-07
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 548
L DG +P LG L + T + V A++ GYR IDTA Y NEK +G+A++ +
Sbjct: 3 LSDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR----ES 58
Query: 549 TVRRDELFIMGKLWSTFHRTDLVETACRISLADL 650
V R E++++ K++ T H + A SL+ L
Sbjct: 59 AVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +3
Query: 453 AIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVETACR 632
A+ GYR +DTA IY NEK +G A++ ++R+++++ KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVRK----SGLKREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 633 ISLADLGLEFFDLFLIHNP 689
S+ L + + DLFLIH P
Sbjct: 109 ESIKKLDIGYVDLFLIHTP 127
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +2
Query: 614 GGDGLQDFTGRPGLGVFRPLPHPQSRCR*RKATVLYRRYHQ*SNTRSSTTWTPGSAWKTS 793
G GL +GR GL P P R R + + HQ +N ++ T +++ +
Sbjct: 1001 GFPGLTGSSGRDGLDGSPGRPGPSGRIGIRDKQQIQQHQHQTTNAATTNTGNDSNSYVIN 1060
Query: 794 LXKGXXQXHRGQQ 832
+ Q H+ QQ
Sbjct: 1061 KQQQHQQLHQHQQ 1073
>SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042)
Length = 815
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 231 SGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEAKLKGSVKEVATLK 368
S R+D K RD L E++ RIA LN K KG ++ A +K
Sbjct: 90 SSASRIDGKKVIRDLAGLLRERFDERIAALNAIK-KGVEEDYAAVK 134
>SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6)
Length = 349
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1
Query: 575 NEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHI 459
N++LV+ H VLD+F+ E FVA + + SVA +
Sbjct: 66 NQELVTAHDDAQENVLDQFADEAFVASAFAAMGESVASV 104
>SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 723 RYRTVAFLQRHRDCG*GRGRKTPSPGLPVKSCRP 622
+YR + F + +CG GRG + S LP +SC P
Sbjct: 280 KYRCI-FPENDTECGGGRGFEEGSRLLPYESCHP 312
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 386 HAGHSLGHSFASSTVNNGNSG 448
H GHS GHSF S V G+SG
Sbjct: 979 HPGHSFGHSFGKSKV-EGSSG 998
>SB_58937| Best HMM Match : Phytochelatin (HMM E-Value=5.6e-37)
Length = 259
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 743 WITDDIFGIELLPSFNDIGIVDEE 672
W T+D G+E + S ++GI EE
Sbjct: 84 WYTEDTLGVESMDSVREVGITVEE 107
>SB_9539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1642
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +3
Query: 228 GSGQRRLDNGKQKRDTGDLT---DEQYKTRIAELNEA 329
G G+ +D+G+ D+G+LT D ++K+ EL+E+
Sbjct: 1367 GGGELTIDSGELTIDSGELTIGGDPEFKSEYRELSES 1403
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,439,438
Number of Sequences: 59808
Number of extensions: 508546
Number of successful extensions: 3795
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3787
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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