Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C01
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 101 5e-22
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 101 5e-22
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 77 2e-14
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 74 1e-13
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 65 7e-11
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 62 7e-10
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 1.1
U00046-4|AAC47043.2| 308|Caenorhabditis elegans Serpentine rece... 27 4.0
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 28 7.5
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 28 10.0
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 101 bits (243), Expect = 5e-22
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 354 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 533
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 534 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPD-VVEGRQ 710
+D+G V+R+ELFI K+W+TFH I L+DL L + DL LIH P EG +
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 711 QF 716
F
Sbjct: 122 LF 123
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 101 bits (243), Expect = 5e-22
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 354 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 533
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 534 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPD-VVEGRQ 710
+D+G V+R+ELFI K+W+TFH I L+DL L + DL LIH P EG +
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 711 QF 716
F
Sbjct: 122 LF 123
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/111 (45%), Positives = 67/111 (60%)
Frame = +3
Query: 357 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 536
A++KL +G MPVI LGT P V+TA+ GYR IDTA +Y NE+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 537 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
+++G V+R+ELFI K W+ +E R SL L LE+ DL+L H P
Sbjct: 66 LEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMP 116
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 80.2 bits (189), Expect = 2e-15
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +3
Query: 354 VATLKLRDGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 530
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y NE +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 531 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
I G ++R+++F+ KL T H + V L L LE+ DL+LIH P
Sbjct: 63 EYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCP 115
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 77.0 bits (181), Expect = 2e-14
Identities = 44/130 (33%), Positives = 67/130 (51%)
Frame = +3
Query: 351 EVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 530
+V L +G MP I LGT + ++ A+ GYR IDTA +Y NE IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 531 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPDVVEGRQ 710
+G ++R+++FI K + D+VE A R SL L L++ DL+L H P +
Sbjct: 64 ELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDG 123
Query: 711 QFYTEDIISD 740
F ++ + D
Sbjct: 124 SFRSDVKVED 133
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/110 (36%), Positives = 57/110 (51%)
Frame = +3
Query: 360 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 539
T+ L G MPVI GT LP L E V A++ GYR ID+A + N++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 540 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
VRR+ELF+ K+W+T+H + L + DL +IH P
Sbjct: 66 KIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWP 115
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 64.9 bits (151), Expect = 7e-11
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = +3
Query: 366 KLRDGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 542
K DG MP I LG + + + ++ +E A+ GYR DTA +Y NE +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 543 DGTVRRDELFIMGKLWSTFHRTDLVETACRI--SLADLGLEFFDLFLIHNP 689
+ R+++FI K+ T + + ET ++ SLA L ++ DL LIH P
Sbjct: 73 QFGLTREDVFITTKV-RTLNENTVEETEKQLANSLATLQTDYVDLLLIHYP 122
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/110 (31%), Positives = 60/110 (54%)
Frame = +3
Query: 360 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 539
++KL G P+I LGT + +++ A+ GYR DTA +Y NEK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 540 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
++R+++FI K+ + + V+ SL+ L + D++LIH P
Sbjct: 62 PKHNLKREDIFITTKMHP--NTVENVKKLVDESLSLLKTSYIDMYLIHYP 109
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 62.1 bits (144), Expect = 5e-10
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 255 GKQKRDTGDLTDEQYKTRIAE-LNEAKLKGSVKEVATLKLRDGTFMPVIALGTALLPPRL 431
G+ G+ +D+ + + L ++ LK S + + L L + MP + LGT
Sbjct: 12 GRSSNSDGNASDDGHPPALTPILLKSYLKNSDAK-SHLTLSNAHSMPAVGLGTWQSNAED 70
Query: 432 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 611
V+ A+ GY IDTA Y NE+ IG AIK I +G V+R++LFI K+ + F
Sbjct: 71 VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDLFITTKVPNLFSSLR 130
Query: 612 LV 617
LV
Sbjct: 131 LV 132
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 61.7 bits (143), Expect = 7e-10
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 387 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 563
MP+I +GT + + ++++ GYR IDTA +Y NE IG+ ++ + ++R+
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 564 ELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
+++I KL + + SL++L +E+ DL LIH P
Sbjct: 71 DIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP 112
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/114 (34%), Positives = 58/114 (50%)
Frame = +3
Query: 354 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 533
+ T L + MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 534 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPDV 695
+V R+E+F+ KLW D V A + S L ++ D+++IH P +
Sbjct: 62 ----CSVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQL 110
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Frame = +3
Query: 366 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 545
KL++G +P +ALGT V+ A+ +GYR+ DTA Y NEK +G A+K +
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62
Query: 546 GTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 689
+ +++++ K+ +S+ + +L+ SL L ++ DL L+H P
Sbjct: 63 HNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYP 112
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = +3
Query: 366 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 545
KL G +P + GT + ++ A+ GYR DTA Y NEK +G+A+K +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 546 GTVRRDELFIMGKLWSTFHRTDLVETACR----ISLADLGLEFFDLFLIHNP 689
+ R ++F+ K F + ACR SL L ++ D++L+H P
Sbjct: 74 HGLSRSDVFLTSKF---FPESKNCREACRGFVEESLQSLQTDYIDMYLVHYP 122
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +3
Query: 438 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 527
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>U00046-4|AAC47043.2| 308|Caenorhabditis elegans Serpentine
receptor, class v protein1 protein.
Length = 308
Score = 27.1 bits (57), Expect(2) = 4.0
Identities = 16/62 (25%), Positives = 24/62 (38%)
Frame = +3
Query: 600 HRTDLVETACRISLADLGLEFFDLFLIHNPDVVEGRQQFYTEDIISDPILGVRLHGRLVR 779
+ T +S+AD+ +E F F P FY E+ PI G++ G
Sbjct: 43 YNTPFFRLCIHLSIADILMELFSTFFFKFPSFGVFPSTFYKENWSVVPIAGMQYLGHAQA 102
Query: 780 HG 785
G
Sbjct: 103 FG 104
Score = 20.6 bits (41), Expect(2) = 4.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 411 ALLPPRLTTEIVETAIDMGYRAIDTAYIY 497
A L +T E V TAI + I+ ++Y
Sbjct: 4 AFLDVAITIEYVSTAISLVCLPINILFVY 32
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 608 GAMECTPQFTHNEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSSLHYFR 435
G QFT + + GA+ +VL + L +S +++++AH+ SS FR
Sbjct: 422 GDAHINSQFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 531 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLF 674
++I DG +R E F M LWS + T D +E D F
Sbjct: 419 DEISDGNMRMREWFTMDALWSALAADSVASTHPLTFKIDKAMEVLDSF 466
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 531 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLF 674
++I DG +R E F M LWS + T D +E D F
Sbjct: 431 DEISDGNMRMREWFTMDALWSALAADSVASTHPLTFKIDKAMEVLDSF 478
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +3
Query: 588 WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPDVVEGRQQFYTEDIISD 740
W+ +E A R SL L LE+ DL+L H P E + D
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQKIESSVED 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,061,443
Number of Sequences: 27780
Number of extensions: 373256
Number of successful extensions: 1308
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -