Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B24
(927 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 220 4e-56
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 180 5e-44
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 155 2e-36
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 150 6e-35
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 139 1e-31
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 136 1e-30
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 129 9e-29
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 128 2e-28
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 122 1e-26
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 103 5e-21
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 99 1e-19
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 97 4e-19
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 94 4e-18
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 93 7e-18
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 93 1e-17
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 91 5e-17
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 88 3e-16
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 85 2e-15
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 84 4e-15
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 81 3e-14
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 73 8e-12
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 73 1e-11
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 69 2e-10
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 64 5e-09
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 60 8e-08
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 56 1e-06
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 56 1e-06
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 54 5e-06
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 52 2e-05
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 42 0.017
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.022
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 40 0.068
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 38 0.48
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.84
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 1.9
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 4.5
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 5.9
UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage ... 33 7.8
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 33 7.8
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 220 bits (538), Expect = 4e-56
Identities = 103/137 (75%), Positives = 120/137 (87%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M FN V S KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 459
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 460 RRAKGRLAALGKDKGKY 510
R+AK R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 180 bits (438), Expect = 5e-44
Identities = 88/137 (64%), Positives = 109/137 (79%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M FN V S K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 459
HY+GQQ+GKV+QVYRKK+V+YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILE 119
Query: 460 RRAKGRLAALGKDKGKY 510
R+ +GK+KGKY
Sbjct: 120 RK-------VGKEKGKY 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 155 bits (376), Expect = 2e-36
Identities = 68/123 (55%), Positives = 98/123 (79%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M FNKQ+ S+ RK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + RG
Sbjct: 30 MKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICRG 89
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 459
H G++ GKV+++ RK+F +Y+ER+ REKANG + ++GIHPS ++ KLK++K+RK ILD
Sbjct: 90 HNHGRE-GKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKILD 148
Query: 460 RRA 468
R+A
Sbjct: 149 RKA 151
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 150 bits (363), Expect = 6e-35
Identities = 73/129 (56%), Positives = 96/129 (74%)
Frame = +1
Query: 109 NKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 288
N + SS RK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 289 GQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 468
G++ GKV VYR K+ +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R
Sbjct: 65 GRE-GKVTSVYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVG 123
Query: 469 KGRLAALGK 495
KGR A K
Sbjct: 124 KGREAVKAK 132
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 139 bits (336), Expect = 1e-31
Identities = 66/121 (54%), Positives = 92/121 (76%)
Frame = +1
Query: 118 VXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 297
V S RK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG KGQ+
Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE 67
Query: 298 VGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 477
GK+ VYR KF V ++++ +EK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+
Sbjct: 68 -GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GK 125
Query: 478 L 480
L
Sbjct: 126 L 126
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 136 bits (328), Expect = 1e-30
Identities = 66/102 (64%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Frame = +1
Query: 211 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 384
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 385 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 510
+VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 129 bits (312), Expect = 9e-29
Identities = 62/132 (46%), Positives = 92/132 (69%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M + +V S RK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 459
+KG + GKV VYRK++ + IE++ R KANG + I S+C+I K +N+DRK +L
Sbjct: 61 THKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLA 119
Query: 460 RRAKGRLAALGK 495
R+A +++ GK
Sbjct: 120 RKASAKVSTKGK 131
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 128 bits (309), Expect = 2e-28
Identities = 65/114 (57%), Positives = 88/114 (77%)
Frame = +1
Query: 169 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 348
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 349 RIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 510
RI REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 93 RITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 122 bits (295), Expect = 1e-26
Identities = 61/126 (48%), Positives = 88/126 (69%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M FN +V S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 459
H K GKV V R K+V+ I+++ + KANG T V I PS +I KL +NKDR+A L
Sbjct: 61 HQK--VAGKVTAVRRSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLA 118
Query: 460 RRAKGR 477
++A+ R
Sbjct: 119 KKAESR 124
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 103 bits (248), Expect = 5e-21
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +1
Query: 109 NKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 288
N + S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G +
Sbjct: 5 NPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSGKFA 64
Query: 289 GQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 468
G++ GKV+ V + + ++ REK NG T +V +HPS C+I KLKM+K RK +++RR
Sbjct: 65 GRE-GKVIAVKLSENRIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRR 123
Query: 469 KGR---LAALGKDK 501
GR LA LG +K
Sbjct: 124 AGREKILAKLGHNK 137
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 99.1 bits (236), Expect = 1e-19
Identities = 49/95 (51%), Positives = 67/95 (70%)
Frame = +1
Query: 91 RXXMXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQV 270
R M ++ V SS RK RK HF+APS RR LMS+ LS EL+ + ++PIR +DEV+V
Sbjct: 17 RHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRV 76
Query: 271 VRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 375
RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 77 TRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 97.5 bits (232), Expect = 4e-19
Identities = 48/114 (42%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Frame = +1
Query: 124 SSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 303
S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG + G
Sbjct: 7 SQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-G 65
Query: 304 KVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 462
+V++V K+ +Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 66 EVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 94.3 bits (224), Expect = 4e-18
Identities = 56/137 (40%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M N V +S RK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV--GIHPSKCVIVKLKMNKDRKAI 453
+KG GKV++V R+ + + +E I ++ N V IHPS C+I +L MN R
Sbjct: 61 GHKG--TGKVVEVRRRDYKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRA 118
Query: 454 LDRRAK---GRLAALGK 495
+ RR + RLA +GK
Sbjct: 119 IKRRQERNAERLARIGK 135
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 93.5 bits (222), Expect = 7e-18
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M N +V SS RK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 280 HYKG 291
YKG
Sbjct: 61 SYKG 64
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 92.7 bits (220), Expect = 1e-17
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Frame = +1
Query: 124 SSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 303
S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG + G
Sbjct: 8 SQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-G 66
Query: 304 KVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRL 480
KV +V K+ +Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K R
Sbjct: 67 KVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKARE 126
Query: 481 AALG 492
A G
Sbjct: 127 AKAG 130
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 90.6 bits (215), Expect = 5e-17
Identities = 47/116 (40%), Positives = 74/116 (63%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M F K RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTKS--KQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 447
+KG + G+V++V K++ +Y+E ++ +G IHPS +I+KL +KD K
Sbjct: 59 DFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 87.8 bits (208), Expect = 3e-16
Identities = 47/131 (35%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +1
Query: 118 VXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 297
+ S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 298 VGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKM-NKDRKAILDRRAKG 474
GKV++V RK+ V IE + ++KA+G YV +H SK +I KL +K+R ++R+ K
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKM 120
Query: 475 RLAALGKDKGK 507
R K K
Sbjct: 121 REEYFSKKSPK 131
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/62 (64%), Positives = 53/62 (85%)
Frame = +1
Query: 181 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQR 360
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 361 EK 366
EK
Sbjct: 105 EK 106
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 84.2 bits (199), Expect = 4e-15
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +1
Query: 112 KQVXSSXRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 288
K S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 289 GQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 468
G + GKV V KK +++E KA+G IHPSK V+ +L ++ R+ L R
Sbjct: 63 GHE-GKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERK 121
Query: 469 K 471
K
Sbjct: 122 K 122
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 81.4 bits (192), Expect = 3e-14
Identities = 44/122 (36%), Positives = 69/122 (56%)
Frame = +1
Query: 112 KQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 291
KQ SS RK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 292 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 471
++ G + ++ + + VYIE K +G A V I+PSK I K + RK L+R+ +
Sbjct: 66 KE-GVISKINYRDYKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKR 124
Query: 472 GR 477
R
Sbjct: 125 AR 126
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 73.3 bits (172), Expect = 8e-12
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 193 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKAN 372
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKAD 66
Query: 373 GATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 468
G Y+ IH SK I KL N RK I++R+A
Sbjct: 67 GTPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 72.5 bits (170), Expect = 1e-11
Identities = 41/105 (39%), Positives = 67/105 (63%)
Frame = +1
Query: 133 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 312
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 313 QVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 447
+ K + VY+ + ++ HPSK I+KL ++ D+K
Sbjct: 82 DIDPKYYRVYLS-LDTDR------QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/113 (31%), Positives = 61/113 (53%)
Frame = +1
Query: 112 KQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 291
+ V RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 292 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 450
+ GKV V + ++ + K +G I+PS +I KL+M R+A
Sbjct: 66 TE-GKVQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 64.1 bits (149), Expect = 5e-09
Identities = 34/109 (31%), Positives = 62/109 (56%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 279
M + V S RKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 426
+KG + GKV+Q+ ++ ++++ I R K +V + PS I+K+
Sbjct: 61 DFKG-KTGKVIQIKPEQQKIFVDNIFRNKFEKTNIFVPLKPSNIQIIKI 108
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 60.1 bits (139), Expect = 8e-08
Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +1
Query: 136 KNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 312
K R R + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK GKV
Sbjct: 5 KMRNRQIYQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVS 63
Query: 313 QVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 426
V + V IE I++EK G V I SK V+ L
Sbjct: 64 HVDTESGSVAIEGIKKEKGKGDKFDVLIRASKVVVTGL 101
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +1
Query: 133 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 312
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 313 QVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 426
+V K V IE +++EK G V IH S ++ L
Sbjct: 64 EVSTAKSSVAIEGVKKEKTKGDKFDVFIHTSNLLVTSL 101
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +1
Query: 199 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 378
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGK 67
Query: 379 TAYVGIHPSKCVIVKLKMNKDRK 447
GI P K I L +++ +
Sbjct: 68 QKGFGISPEKLQITHLDLSRSER 90
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 54.0 bits (124), Expect = 5e-06
Identities = 28/104 (26%), Positives = 56/104 (53%)
Frame = +1
Query: 136 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 316 VYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 447
V K V+++E + EK +G + S + L + +++
Sbjct: 66 VDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKR 109
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 52.4 bits (120), Expect = 2e-05
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +1
Query: 199 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 378
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE + KA+G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEGVTISKADGK 68
Query: 379 TAYVGIHPSKCVIVKLKMNKD 441
I S I KL ++++
Sbjct: 69 QVPFFIDHSNISITKLDLSRN 89
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 42.3 bits (95), Expect = 0.017
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Frame = +1
Query: 136 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY---------- 285
K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 8 KQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDFGFPNSVKAEA 67
Query: 286 KGQQVGK----------VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 426
+G+++G+ ++ V K VY++ + ++G + IHPS V+ KL
Sbjct: 68 RGKRLGQSRGRSGVKSTIVGVDTKSGFVYVDGVTMTTSDGKEEALPIHPSNLVVTKL 124
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.022
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 229 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 366
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 40.3 bits (90), Expect = 0.068
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 100 MXFNKQVXSSXRKNRKRHFSAPSHIRRVLMSSP 198
M FN + NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.5 bits (83), Expect = 0.48
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +1
Query: 163 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 342
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 343 IERI 354
+E +
Sbjct: 64 VEGV 67
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.84
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 238 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 354
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 35.5 bits (78), Expect = 1.9
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -3
Query: 553 YLFKRPPWLWQFPRCIYPCLCQAQPVCPLLCDRGLLCG 440
YL P W W FP P L + Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 4.5
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 232 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 366
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 5.9
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +1
Query: 244 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 390
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage
phiV10|Rep: Putative acetyltransferase - Phage phiV10
Length = 338
Score = 33.5 bits (73), Expect = 7.8
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = -1
Query: 450 CFAVF-IHLQLDNDTL*RVNADICCCTIGLFSLNPL--NVYNKL----FTIHLHHFANL- 295
CF VF I+ + N T+ + I CT+G++ ++PL ++ + ++IH F +
Sbjct: 254 CFMVFMINTPVKNKTILHIVKFISPCTLGIYLVHPLIIDILRRFLLDKYSIHPEMFIVIP 313
Query: 294 LTFVVSTYNLNFIVFANRHG 235
L+F+V +L +VF + G
Sbjct: 314 LSFIVFLISLAIVVFLRKFG 333
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 33.5 bits (73), Expect = 7.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 345 NVYNKLFTIHLHHFANLLTFVVSTYNLNFIVF 250
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.5 bits (73), Expect = 7.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 223 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 387
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.5 bits (73), Expect = 7.8
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 238 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 366
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,726,015
Number of Sequences: 1657284
Number of extensions: 9402521
Number of successful extensions: 25259
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 24422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25217
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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