Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B24
         (927 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   1.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   4.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.8  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 412 HTLKGECRHMLLHHWPFLFESS 347
           HT + +C H LL H P L + S
Sbjct: 352 HTPEPDCIHELLGHMPLLADPS 373


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = -1

Query: 438 FIHLQLDNDTL*RVNADICCCTIGLFSLNPLNVYNKLFTIHLHHFANLLTFVVSTYNLNF 259
           F   +L+N +L  +N  +    +GL+ LN  + ++   +I      N + F V+ +  +F
Sbjct: 316 FCKKKLENYSLQLINHRVVFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFPVAGFISDF 375


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 12/52 (23%), Positives = 24/52 (46%)
 Frame = +1

Query: 169 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYR 324
           HI R +  S   +   ++   KS+P+RK  E++  +  +K      ++   R
Sbjct: 576 HIMRSITESGGRRRQTREKRKKSLPVRKLLELERAQHEFKNGDSSSLLDKMR 627


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,647
Number of Sequences: 336
Number of extensions: 2492
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)