Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B20
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical ... 201 6e-52
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 33 0.20
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 33 0.20
Z74029-1|CAA98431.1| 293|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z82056-1|CAB04854.1| 325|Caenorhabditis elegans Hypothetical pr... 31 1.1
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 31 1.1
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 29 3.3
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 29 3.3
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 29 4.4
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 29 4.4
Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical p... 29 5.8
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 29 5.8
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 29 5.8
>AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical
protein Y71H10A.2 protein.
Length = 536
Score = 201 bits (490), Expect = 6e-52
Identities = 91/228 (39%), Positives = 142/228 (62%)
Frame = +1
Query: 193 SVAEYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGF 372
SV + YAG S+ +TG TGF+GKV+VEKLL + + +YL++R +KG++ +ERL L
Sbjct: 4 SVRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHD 63
Query: 373 KLFGPLQKENPKCFEKLHVVPGDILMDDLGISIADRELIQRECQVIFHCAACVRFDMFLR 552
LF +++E P+ F+KL + GD+++++LG+ D LI+ V+ H AA V+FD LR
Sbjct: 64 PLFNRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLR 123
Query: 553 DAVNLNTAATKRVLELAKDFNNLEAFIHVSTSYCRCELDLLEEKLYPSPHRPEHIMDCMS 732
AV +N TKR+++L +L+ +HVST+Y C+ EK+Y SP P+ ++D +S
Sbjct: 124 AAVTMNVIGTKRIIDLCHQIKDLKVLVHVSTAYANCDRFETTEKIYKSPMAPQKLVDALS 183
Query: 733 WMDDQLVAHMQPKLIEPQPNTYAYTKSLTEDLXSQFEGXFPITXARPS 876
WMDD+ + + PK++ +PNTY TK+L E P+ RPS
Sbjct: 184 WMDDETLTKITPKILGLRPNTYTLTKALAESTIETEAKDIPVIIIRPS 231
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 574 AATKRVLELAKDFNNLEAFIHVSTSYCRCELDLLEEKLYP 693
AA K +E+ D NN F+++ TS C C+LD + + L+P
Sbjct: 233 AAFKGKIEI--DTNNTAGFMNLHTSRCLCQLDTVSKALWP 270
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 574 AATKRVLELAKDFNNLEAFIHVSTSYCRCELDLLEEKLYP 693
AA K +E+ D NN F+++ TS C C+LD + + L+P
Sbjct: 195 AAFKGKIEI--DTNNTAGFMNLHTSRCLCQLDTVSKALWP 232
>Z74029-1|CAA98431.1| 293|Caenorhabditis elegans Hypothetical
protein C45B11.3 protein.
Length = 293
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 205 YYAGKSIFITGATGFMGKVLVEKLLK 282
++AGK++FITGA+ +GK + KL K
Sbjct: 10 FFAGKTVFITGASRGIGKEIALKLAK 35
>Z82056-1|CAB04854.1| 325|Caenorhabditis elegans Hypothetical
protein T26H5.3 protein.
Length = 325
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 228 ENRFARVVFGYASRWRHFQLFFLKFFLI 145
ENRF ++FG S+WRHF+ + + F I
Sbjct: 113 ENRF-HILFGQNSKWRHFRKYAIVFSYI 139
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +1
Query: 229 ITGATGFMGKVLVEKLLKSCPGLNKLYLLMRP-KKGQSSKERLDDFLGFKLFGPLQKENP 405
ITG T +GK +E+L K+ GL K YL+ R K ++K+ L + G ++ +
Sbjct: 508 ITGGTDGIGKAYIEELCKT-RGLKKFYLIGRNIDKLNNTKKELVEQHGCEVMCHVHD--- 563
Query: 406 KCFEK--LHVVPGDILMDDLGISI 471
FEK L +P D+ D+GI I
Sbjct: 564 --FEKDDLSALPKDLETLDVGILI 585
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 490 QRECQVIFHCAA-CVRFDMF--LRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSYCRC 660
Q E + H AA C + +AV N + + LE + + ++ F+H+ST
Sbjct: 78 QNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRFVHISTDEVYG 137
Query: 661 ELDLLEEK 684
+ DL E +
Sbjct: 138 DSDLSENE 145
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 661 ELDLLEEKLYPSPHRPEHIMDCMSW---MDDQLVAHMQPKLIEPQP 789
EL+ E+ +P P PE I+D W ++ H+ + I P P
Sbjct: 1468 ELETREKTDFPQPREPEKIVDEKRWVELVEQHFEEHLSQRSISPVP 1513
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 184 PSASVAEYYAGKSIFITGATGFMGKVLVEKLL 279
PS K I ITG GF+G LV+KL+
Sbjct: 126 PSVRYRNEETRKRILITGGAGFVGSHLVDKLM 157
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 184 PSASVAEYYAGKSIFITGATGFMGKVLVEKLL 279
PS K I ITG GF+G LV+KL+
Sbjct: 126 PSVRYRNEETRKRILITGGAGFVGSHLVDKLM 157
>Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 211 AGKSIFITGATGFMGKVLVEKLLKSCPGLNKL 306
A K+IFITGA +G LV +LLK PG+ L
Sbjct: 2 APKTIFITGANRGIGLGLVRELLK-VPGVEAL 32
>Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 211 AGKSIFITGATGFMGKVLVEKLLKSCPGLNKL 306
A K+IFITGA +G LV +LLK PG+ L
Sbjct: 2 APKTIFITGANRGIGLGLVRELLK-VPGVEAL 32
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -2
Query: 383 PNNLNPRKSSNLSLLLCPFLGLINR*SLFKPGHDFNSFSTNTFPMKPVAP 234
P + P S+ + PF I R +LF P NS T P +P P
Sbjct: 35 PTSCIPSTSTGMLSPNLPFSATIPRVNLFPPSQPANSLILPTIPAQPFIP 84
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -2
Query: 383 PNNLNPRKSSNLSLLLCPFLGLINR*SLFKPGHDFNSFSTNTFPMKPVAP 234
P + P S+ + PF I R +LF P NS T P +P P
Sbjct: 37 PTSCIPSTSTGMLSPNLPFSATIPRVNLFPPSQPANSLILPTIPAQPFIP 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,955,223
Number of Sequences: 27780
Number of extensions: 406790
Number of successful extensions: 1045
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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