Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B20
(879 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to... 99 2e-21
At5g22500.1 68418.m02626 acyl CoA reductase, putative / male-ste... 98 8e-21
At3g44560.1 68416.m04789 acyl CoA reductase, putative similar to... 96 3e-20
At3g44540.1 68416.m04787 acyl CoA reductase, putative similar to... 95 4e-20
At3g11980.1 68416.m01482 male sterility protein 2 (MS2) identica... 91 1e-18
At3g56700.1 68416.m06307 male sterility protein, putative simila... 84 1e-16
At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to... 60 3e-09
At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase fam... 41 0.001
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam... 40 0.002
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam... 38 0.012
At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to... 34 0.11
At1g32100.1 68414.m03950 pinoresinol-lariciresinol reductase, pu... 33 0.33
At4g27250.1 68417.m03912 dihydroflavonol 4-reductase family / di... 32 0.58
At1g19540.1 68414.m02434 isoflavone reductase, putative similar ... 29 3.1
At5g65810.1 68418.m08280 expressed protein similar to unknown pr... 29 4.1
At2g34460.1 68415.m04229 flavin reductase-related low similarity... 29 4.1
At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase fam... 29 5.4
At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase fam... 29 5.4
At2g21280.1 68415.m02533 expressed protein similar to YfhF (GI:2... 28 9.5
>At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 402
Score = 99 bits (238), Expect = 2e-21
Identities = 82/259 (31%), Positives = 126/259 (48%), Gaps = 34/259 (13%)
Frame = +1
Query: 202 EYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERL-DDFLGFKL 378
++ K+I +TGATGF+ KV VEK+L+ P + KLYLL+R +++ +RL + +L
Sbjct: 7 QFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKEL 66
Query: 379 FGPL------QKENPKCFEKLHVVPGDILMDDLGISIAD-RELIQRECQVIFHCAACVRF 537
F L +K N +EK+ VPGDI D LGI+ + RE +Q+E ++ + AA F
Sbjct: 67 FKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVNVAATTNF 126
Query: 538 DMFLRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSY-CR------------------- 657
D + +NT VL AK ++ +HVST+Y C
Sbjct: 127 DERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFIMEEIRNE 186
Query: 658 --CELDL-LEEKLYPSPHRPEHIMDCMSWMDDQLVAH---MQPKLIEPQPNTYAYTKSLT 819
+LD+ LE +L + + DC S D L M+ + PNTY +TKS+
Sbjct: 187 NGLQLDINLERELMKQRLKELNEQDC-SEEDITLSMKELGMERAKLHGWPNTYVFTKSMG 245
Query: 820 EDLXSQFEGXFPITXARPS 876
E L + + P+ RP+
Sbjct: 246 EMLLGKHKENLPLVIIRPT 264
>At5g22500.1 68418.m02626 acyl CoA reductase, putative /
male-sterility protein, putative similar to acyl CoA
reductase [Simmondsia chinensis] GI:5020215; contains
Pfam profile PF03015: Male sterility protein; identical
to cDNA male sterility 2-like protein GI:1491614
Length = 491
Score = 97.9 bits (233), Expect = 8e-21
Identities = 84/261 (32%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Frame = +1
Query: 190 ASVAEYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERL-DDFL 366
++ ++ K+I ITGA GF+ KVLVEK+L+ P + K+YLL+R +S+ +RL + +
Sbjct: 3 SNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVM 62
Query: 367 GFKLFGPLQKE------NPKCFEKLHVVPGDILMDDLGISIADRELIQR---ECQVIFHC 519
LF L+ N EK+ VPGDI +D+LG+ D +LIQR E +I +
Sbjct: 63 EIDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLK--DTDLIQRMWSEIDIIINI 120
Query: 520 AACVRFDMFLRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSYCRCEL-DLLEEKLYP- 693
AA FD + +NT VL AK + +HVST+Y E LL EK +
Sbjct: 121 AATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKM 180
Query: 694 ----SPHRP-----EH---------IMDCMSWMDDQLVAH--MQPKLIEPQPNTYAYTKS 813
S R EH + DC Q + M + PNTY +TK+
Sbjct: 181 GETLSGDRELDINIEHDLMKQKLKELQDCSDEEISQTMKDFGMARAKLHGWPNTYVFTKA 240
Query: 814 LTEDLXSQFEGXFPITXARPS 876
+ E L ++ P+ RP+
Sbjct: 241 MGEMLMGKYRENLPLVIIRPT 261
>At3g44560.1 68416.m04789 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 449
Score = 95.9 bits (228), Expect = 3e-20
Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Frame = +1
Query: 193 SVAEYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERL-DDFLG 369
S + K+I +TGATGF+ KV VEK+L+ P +NKLYL++R +++ +RL +
Sbjct: 4 SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFE 63
Query: 370 FKLFGPL------QKENPKCFEKLHVVPGDILMDDLGISIAD-RELIQRECQVIFHCAAC 528
LF L +K N EK+ V GDI MD LG+ ++ RE +Q+E ++ + AA
Sbjct: 64 KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123
Query: 529 VRFDMFLRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSY-CRCELDLLEEK 684
FD + +NT VL AK + +HVST+Y C + LL EK
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEK 176
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 787 PNTYAYTKSLTEDLXSQFEGXFPITXARPS 876
PNTY +TKS+ E L + P+ RP+
Sbjct: 235 PNTYVFTKSMGEMLLGNHKENLPLVIIRPT 264
>At3g44540.1 68416.m04787 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 433
Score = 95.5 bits (227), Expect = 4e-20
Identities = 81/257 (31%), Positives = 121/257 (47%), Gaps = 32/257 (12%)
Frame = +1
Query: 202 EYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERL-DDFLGFKL 378
++ K+I +TG GF+ KV VEK+L+ P + KL+LL+R +S+ +R + L L
Sbjct: 7 QFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKDL 66
Query: 379 FGPLQK----ENPKCF--EKLHVVPGDILMDDLGISIAD-RELIQRECQVIFHCAACVRF 537
F L+ EN K F EK+ +PGDI +D+LG+ +D + + E +I + AA F
Sbjct: 67 FRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTNF 126
Query: 538 DMFLRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSYCRCELD-LLEEKLYP-----SP 699
D +++NT VL AK + +HVST+Y R E LL EK + +
Sbjct: 127 DERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETLNG 186
Query: 700 HRPEHIMDCMSWMDDQLVAHMQPKLIEPQ------------------PNTYAYTKSLTED 825
HR I M M +L + E + PNTY +TKS+ E
Sbjct: 187 HRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSMGEM 246
Query: 826 LXSQFEGXFPITXARPS 876
L + PI RP+
Sbjct: 247 LLGNYRENLPIVIIRPT 263
>At3g11980.1 68416.m01482 male sterility protein 2 (MS2) identical
to male sterility protein 2 (MS2) SP:Q08891 (Arabidopsis
thaliana)
Length = 616
Score = 90.6 bits (215), Expect = 1e-18
Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Frame = +1
Query: 178 MAPSASVAEYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERL- 354
M + + GK ITG+TGF+ KVL+EK+L+ P ++K+YLL++ K +++ ERL
Sbjct: 118 MKEGLGIISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLK 177
Query: 355 DDFLGFKLFGPLQKENPKCF-----EKLHVVPGDILMDDLGISIADRELIQRECQVIFHC 519
++ L +LF L++ + + KL V G+I ++G+ E I +E VI +
Sbjct: 178 NEVLDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQADSAEEIAKEVDVIINS 237
Query: 520 AACVRFDMFLRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSY 651
AA F+ A+++NT ++ AK L+ F+ VST+Y
Sbjct: 238 AANTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAY 281
>At3g56700.1 68416.m06307 male sterility protein, putative similar
to SP|Q08891 Male sterility protein 2 {Arabidopsis
thaliana}; contains Pfam profile PF03015: Male sterility
protein
Length = 527
Score = 84.2 bits (199), Expect = 1e-16
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 7/234 (2%)
Frame = +1
Query: 196 VAEYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERL-DDFLG- 369
+ + GKS +TGATGF+ KVL+EKLL+ + K++LLMR K +S+ +RL D+ +
Sbjct: 77 IVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISS 136
Query: 370 --FKLFGPLQKENPKCFEKLHVVP--GDILMDDLGISIADRELIQRECQVIFHCAACVRF 537
FKL + + + F K ++P GDI D+LGI +I E VI C F
Sbjct: 137 DLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIKSEIANMISEEIDVIISCGGRTTF 196
Query: 538 DMFLRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSYCRCELDLLEE-KLYPSPHRPEH 714
D A+++N V ++ LE + + + +L++ E KL R
Sbjct: 197 DDRYDSALSVNALGPAYVTG-KREGTVLETPLCIGEN-ITSDLNIKSELKLASEAVRKFR 254
Query: 715 IMDCMSWMDDQLVAHMQPKLIEPQPNTYAYTKSLTEDLXSQFEGXFPITXARPS 876
+ + + + Q E N+Y +TK++ E + G P+ RPS
Sbjct: 255 GREEIKKLKELGFERAQHYGWE---NSYTFTKAIGEAVIHSKRGNLPVVIIRPS 305
>At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 409
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +1
Query: 202 EYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLF 381
++ ++I +TGA+GF+ KVLVE++L+ P + +LYLL+R +S+++R D LG F
Sbjct: 7 QFLENRTILVTGASGFLAKVLVERILRLQPNVKRLYLLVRASDKKSAEQRYDVALGINTF 66
Query: 382 GPLQKEN 402
G + N
Sbjct: 67 GAINVLN 73
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 787 PNTYAYTKSLTEDLXSQFEGXFPITXARPS 876
PNTY +TK++ E L + PI RP+
Sbjct: 161 PNTYVFTKAMGEMLLGHYRETMPIVIIRPT 190
>At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461,
Saccharopolyspora spinosa GI:15077647, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 664
Score = 41.1 bits (92), Expect = 0.001
Identities = 47/157 (29%), Positives = 63/157 (40%), Gaps = 3/157 (1%)
Frame = +1
Query: 208 YAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLFGP 387
Y K+I ITGA GF+ + +L++S P K+ +L ++LD K P
Sbjct: 4 YKPKNILITGAAGFIASHVANRLVRSYPDY-KIVVL----------DKLDYCSNLKNLNP 52
Query: 388 LQKENPKCFEKLHVVPGDILMDDLGISIADRELIQRECQVIFHCAACVRFDMFLRDAVNL 567
K +P V GDI DL + LI E I H AA D ++
Sbjct: 53 -SKSSP----NFKFVKGDIASADL----VNYLLITEEIDTIMHFAAQTHVDNSFGNSFEF 103
Query: 568 ---NTAATKRVLELAKDFNNLEAFIHVSTSYCRCELD 669
N T +LE K + FIHVST E D
Sbjct: 104 TKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 140
>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 669
Score = 39.9 bits (89), Expect = 0.002
Identities = 46/157 (29%), Positives = 62/157 (39%), Gaps = 3/157 (1%)
Frame = +1
Query: 208 YAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLFGP 387
Y K+I ITGA GF+ + +L++S P K+ +L ++LD K P
Sbjct: 4 YTPKNILITGAAGFIASHVANRLIRSYPDY-KIVVL----------DKLDYCSNLKNLNP 52
Query: 388 LQKENPKCFEKLHVVPGDILMDDLGISIADRELIQRECQVIFHCAACVRFDMFLRDAVNL 567
K +P V GDI DL + LI I H AA D ++
Sbjct: 53 -SKHSP----NFKFVKGDIASADL----VNHLLITEGIDTIMHFAAQTHVDNSFGNSFEF 103
Query: 568 ---NTAATKRVLELAKDFNNLEAFIHVSTSYCRCELD 669
N T +LE K + FIHVST E D
Sbjct: 104 TKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 140
>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
protein low similarity to dTDP-D-glucose-4,6-dehydratase
from Aneurinibacillus thermoaerophilus GI:16357461,
Sphingomonas sp. GI:1314581; contains Pfam profile
PF01370: NAD dependent epimerase/dehydratase family;
putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
Length = 667
Score = 37.5 bits (83), Expect = 0.012
Identities = 45/157 (28%), Positives = 62/157 (39%), Gaps = 3/157 (1%)
Frame = +1
Query: 208 YAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLFGP 387
Y K+I ITGA GF+ + +L+++ P K+ +L ++LD K P
Sbjct: 6 YKPKNILITGAAGFIASHVANRLIRNYPDY-KIVVL----------DKLDYCSDLKNLDP 54
Query: 388 LQKENPKCFEKLHVVPGDILMDDLGISIADRELIQRECQVIFHCAACVRFDMFLRDAVNL 567
+P V GDI DDL + LI I H AA D ++
Sbjct: 55 -SFSSPN----FKFVKGDIASDDL----VNYLLITENIDTIMHFAAQTHVDNSFGNSFEF 105
Query: 568 ---NTAATKRVLELAKDFNNLEAFIHVSTSYCRCELD 669
N T +LE K + FIHVST E D
Sbjct: 106 TKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 142
>At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein;
No start codon identified, may contain anomalous
splicing at 5' end.
Length = 380
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 496 ECQVIFHCAACVRFDMFLRDAVNLNTAATKRVLELAKDFNNLEAFIHVSTSY-CRCELDL 672
+ I + AA +FD A+ +NT VL AK ++ +HVST+Y C + L
Sbjct: 4 QVDAIVNLAATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGL 63
Query: 673 LEEKLY 690
+ E Y
Sbjct: 64 IMETPY 69
>At1g32100.1 68414.m03950 pinoresinol-lariciresinol reductase,
putative similar to pinoresinol-lariciresinol reductase
TH1 [Tsuga heterophylla][GI:7578915]; contains
isoflavone reductase domain PF02716
Length = 317
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 223 IFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLFG 384
+ + GATG++GK +V L ++ Y+L RP+ G E++ FL FK G
Sbjct: 12 VLVVGATGYIGKRIVRACLAEG---HETYVLQRPEIGLEI-EKVQLFLSFKKLG 61
>At4g27250.1 68417.m03912 dihydroflavonol 4-reductase family /
dihydrokaempferol 4-reductase family similar to
dihydrokaempferol 4-reductase, Ipomoea purpurea
(GI:4239849), Medicago sativa, PIR2:S61416
Length = 354
Score = 31.9 bits (69), Expect = 0.58
Identities = 37/125 (29%), Positives = 55/125 (44%)
Frame = +1
Query: 229 ITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLFGPLQKENPK 408
+TGA+G++G LV+ LL+ +G + L D + F KEN
Sbjct: 15 VTGASGYIGSWLVKSLLQ---------------RGYTVHATLRDLAKSEYFQSKWKEN-- 57
Query: 409 CFEKLHVVPGDILMDDLGISIADRELIQRECQVIFHCAACVRFDMFLRDAVNLNTAATKR 588
E+L + D L DD A + C +FH AA + FD+ D VNL + +
Sbjct: 58 --ERLRLFRAD-LRDDGSFDDA-----VKGCDGVFHVAASMEFDI-SSDHVNLESYVQSK 108
Query: 589 VLELA 603
V+E A
Sbjct: 109 VIEPA 113
>At1g19540.1 68414.m02434 isoflavone reductase, putative similar to
SP|P52577; contains isoflavone reductase domain PF02716
Length = 310
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 223 IFITGATGFMGKVLVEKLLKS 285
I + GATG +GKVLVE+ KS
Sbjct: 5 ILVIGATGLIGKVLVEESAKS 25
>At5g65810.1 68418.m08280 expressed protein similar to unknown
protein (emb CAB66910.1)
Length = 258
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -3
Query: 430 QREVSR--STSGFPFVAARIT*IRGSRLISLYCFALFWASL-IGRAYSNQG 287
+R+V R + FPFV A + R S L+S+ C L A L IG AYS G
Sbjct: 3 RRQVRRVGDSGSFPFVGALHSKSRSSPLLSV-CLVLVGACLLIGYAYSGPG 52
>At2g34460.1 68415.m04229 flavin reductase-related low similarity to
SP|P30043 Flavin reductase {Homo sapiens}
Length = 280
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 217 KSIFITGATGFMGKVLVEKLL 279
K +F+ GATG GK +VE+LL
Sbjct: 47 KKVFVAGATGQTGKRIVEQLL 67
>At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 343
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 205 YYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLF 381
+ + I +TG GF+G LV+KL+++ K +++ SK+ L ++G F
Sbjct: 27 FQSNMRILVTGGAGFIGSHLVDKLMQN----EKNEVIVADNYFTGSKDNLKKWIGHPRF 81
>At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 343
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 205 YYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGFKLF 381
+ + I +TG GF+G LV+KL+++ K +++ SK+ L ++G F
Sbjct: 27 FQSNMRILVTGGAGFIGSHLVDKLMQN----EKNEVIVADNYFTGSKDNLKKWIGHPRF 81
>At2g21280.1 68415.m02533 expressed protein similar to YfhF
(GI:2804536) [Bacillus subtilis]
Length = 347
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +1
Query: 220 SIFITGATGFMGKVLVEKL 276
++ +TGATGF+G+ LV++L
Sbjct: 47 TVSVTGATGFIGRRLVQRL 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,915,554
Number of Sequences: 28952
Number of extensions: 378016
Number of successful extensions: 1030
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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