Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B19
         (844 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O74643 Cluster: Cytochrome P450; n=2; Agaricomycetes|Re...    35   2.9  
UniRef50_Q7R1E2 Cluster: GLP_306_19898_9507; n=1; Giardia lambli...    34   3.9  
UniRef50_A2ESJ4 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_A2F471 Cluster: Putative uncharacterized protein; n=1; ...    34   5.1  
UniRef50_Q59QW7 Cluster: Potential Dol-P-Man dependent alpha(1-3...    34   5.1  
UniRef50_Q11PV1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  
UniRef50_Q8TW83 Cluster: Predicted membrane protein; n=1; Methan...    33   9.0  

>UniRef50_O74643 Cluster: Cytochrome P450; n=2; Agaricomycetes|Rep:
           Cytochrome P450 - Coprinus cinereus (Inky cap fungus)
           (Hormographiella aspergillata)
          Length = 524

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -3

Query: 140 LTSQIIYFRKFLTGSLRCSTPPHEKPVRVITQNLKD 33
           L + IIYFRKF     R   PP  KP+ V+  N+KD
Sbjct: 16  LVASIIYFRKFKANPARAHLPPGPKPIPVL-GNVKD 50


>UniRef50_Q7R1E2 Cluster: GLP_306_19898_9507; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_306_19898_9507 - Giardia lamblia ATCC
            50803
          Length = 3463

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
 Frame = +2

Query: 77   VVSNNANFLLKIYENK*FG*LNFCVLRFVYTINNKT--IIVGVCGELRAVLSIGNVLTMV 250
            ++S + N + K+ E    G + F  + F+  + + T  +IVG     ++VL    + T +
Sbjct: 3288 MISKHGNLVRKLLERLYGGSIIFDAIIFLLFLISLTAYLIVGCVFVYKSVLLTVRMYTKI 3347

Query: 251  LHVTSMCCGIKLRTICFV-IAYLHLVSCVLDIAFHLLTVAIVTD 379
              VT   C IK    CF+ +  + LV  +L +A  ++++ I+ D
Sbjct: 3348 SAVTRCACSIKYLVSCFLPLDLMFLVPALLVVAL-IMSLPIIYD 3390


>UniRef50_A2ESJ4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1000

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 18/47 (38%), Positives = 31/47 (65%)
 Frame = -3

Query: 170 LYIQIEAHKNLTSQIIYFRKFLTGSLRCSTPPHEKPVRVITQNLKDS 30
           L IQ +  ++LTSQ+  FRK++   LR +    +K ++V+TQ L+D+
Sbjct: 842 LVIQNKGSESLTSQLEIFRKYIE-KLRRNRTKLKKKIKVLTQTLEDT 887


>UniRef50_A2F471 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 582

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
 Frame = +2

Query: 149 VLRFVYTINNKTIIVGVCGELRAVLSIGNVLTMVLHVTSMCCGI--KLRTICF-VIAYLH 319
           +LRFV    N+++++G C  +    S+  + +   +    C  I  ++ +IC  +I YL 
Sbjct: 272 ILRFVEL--NESLVLGFCNFIGNKASVSLMQSTSRNNIINCVFIDNQVTSICTGLITYLQ 329

Query: 320 LVSCVLDIAFHLLTVAIV-TDGFQCDVN 400
           +  CVLD+ +    +A + T G + D N
Sbjct: 330 MTDCVLDVKYSFFGLAYIRTPGIKFDEN 357


>UniRef50_Q59QW7 Cluster: Potential Dol-P-Man dependent alpha(1-3)
           mannosyltransferase; n=2; Candida albicans|Rep:
           Potential Dol-P-Man dependent alpha(1-3)
           mannosyltransferase - Candida albicans (Yeast)
          Length = 530

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 23/82 (28%), Positives = 37/82 (45%)
 Frame = +3

Query: 237 FSQWFYTSLACAVESNYALYVSSSLICIWCLVSWI*RFIC*QLLLSLMASSVTLITISSA 416
           F  W+  SL   +  N+ +Y +   + IW +  W     C  +  S   SS+TL++I S 
Sbjct: 445 FLSWYAWSLPGLLYLNFPIYFA---LPIWFVHEW-----CWNVFPSNSISSITLVSILSL 496

Query: 417 LYPGRLWSLYSWF*TSEPTAST 482
           +     W+   WF  S   +ST
Sbjct: 497 IIGATWWNFDHWFPPSVNLSST 518


>UniRef50_Q11PV1 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 133

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3

Query: 137 TSQIIYFRKFLTGSLRCSTPPH 72
           TSQI Y  + LTGS+ C+ PPH
Sbjct: 97  TSQISYASEILTGSVTCNAPPH 118


>UniRef50_Q8TW83 Cluster: Predicted membrane protein; n=1;
           Methanopyrus kandleri|Rep: Predicted membrane protein -
           Methanopyrus kandleri
          Length = 144

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
 Frame = +2

Query: 164 YTINNKTIIVGVCGELRAVLSI-----GNVLTMVLHVTSMCCGIKLRTICFVI--AYLHL 322
           YT++   ++VG CG LR+ + +     G+VL +   V ++C       +C+++   YLH 
Sbjct: 40  YTVSELVMMVGTCGILRSAIPLAAVGWGDVLNVA--VVAICASYIPFCVCWIVFRVYLHC 97

Query: 323 VSCVLDIAFHLLTV 364
               L     L+TV
Sbjct: 98  CGTALPDGGSLMTV 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,071,528
Number of Sequences: 1657284
Number of extensions: 19366763
Number of successful extensions: 45477
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 43683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45456
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)