Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B19
         (844 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0076 - 622789-623689,623714-623931                               30   2.0  
12_02_0580 + 20776820-20777247,20777341-20778109,20779280-207794...    29   3.5  
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851...    29   3.5  

>06_01_0076 - 622789-623689,623714-623931
          Length = 372

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = +2

Query: 422 PWAVVEP---LLLVLNLGTHGFYPFPGTFR 502
           PW V+     L+L L++G H  Y FPGTF+
Sbjct: 233 PWLVISGDMLLMLDLSVGIHHSYGFPGTFQ 262


>12_02_0580 +
           20776820-20777247,20777341-20778109,20779280-20779447,
           20779877-20780236
          Length = 574

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 252 RTIVRTFPIERTARNSPHTPTIIVLLLIVYT 160
           R  VR  P E T ++ PH PT+  L L V T
Sbjct: 394 RLTVRVLPAEDTVKDIPHLPTVTKLRLDVNT 424


>09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,
            8511209-8511523,8511576-8511682,8512559-8512629,
            8512952-8513029,8513390-8513454,8514224-8514274,
            8514373-8514414,8514785-8515105,8515154-8517880
          Length = 1480

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 159  LYIQSTIKLLLWVCVVNCVQ-FFQLETFSQWFYTSLACAVESNYALYV 299
            L  QS  +  L  CV N ++ FFQ+   SQW+Y    C + S +  Y+
Sbjct: 1031 LSFQSKWRTYLRSCVRNNLRTFFQVLVQSQWWYNLEGCLLHSPHLKYL 1078


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,125,248
Number of Sequences: 37544
Number of extensions: 516471
Number of successful extensions: 1099
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)