Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B19
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81593-3|CAB04741.1|  332|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL117207-5|CAB60395.1|  375|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z81575-3|CAB04629.2|  313|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81047-12|CAB60283.1|  322|Caenorhabditis elegans Hypothetical p...    29   3.1  
U56965-8|AAB52663.1|  314|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81479-9|CAE17735.1|  215|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL023856-3|CAA19562.2|  335|Caenorhabditis elegans Hypothetical ...    29   5.5  

>Z81593-3|CAB04741.1|  332|Caenorhabditis elegans Hypothetical
           protein T20B3.3 protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 212 RAVLSIGNVLTMVLHVTSMCC-----GIKLRTICFVIAYLHLVSCVLDIAFHLLTVAIV 373
           R VL + + +++ +HV  + C      I ++++ + +  +HL SC+LD+    LT   V
Sbjct: 19  RLVLHVISFISIPIHVFGVFCVFFKTPISMQSVKWSMMNVHLFSCLLDLGLSFLTTPFV 77


>AL117207-5|CAB60395.1|  375|Caenorhabditis elegans Hypothetical
           protein Y60A3A.7 protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 390 VTLITISSALYPGRLWSLYSWF*TSEP 470
           +TLI IS  ++P  LW LYSW+ T  P
Sbjct: 3   ITLILISIIIFPILLW-LYSWYITDIP 28


>Z81575-3|CAB04629.2|  313|Caenorhabditis elegans Hypothetical
           protein R08H2.3 protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +2

Query: 281 KLRTICFVIAYLHLVSCVLDIAFHLLTVAIVTDGFQCDVNYDKFSAIPWAVVEPLLLVLN 460
           K+R + +++  LH V  +LDI    LT  +        VN+   S  P  +  PL L +N
Sbjct: 44  KMRHVKWILLLLHFVGALLDIFLSCLTTPV--------VNFPMISGYPLGLAVPLGLPIN 95

Query: 461 L 463
           +
Sbjct: 96  V 96


>Z81047-12|CAB60283.1|  322|Caenorhabditis elegans Hypothetical
           protein C41G6.14 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 498 LGVSTICMLSTHRLSQSPDAIPVFSTYTWLTSSIFSLI 611
           L + +IC L  HR+     ++PV ST  + +  +FS++
Sbjct: 107 LDILSICFLQKHRVIMRLKSLPVISTGMYTSIIVFSIV 144


>U56965-8|AAB52663.1|  314|Caenorhabditis elegans Hypothetical
           protein C15H9.3 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +2

Query: 209 LRAVLSIGNVLTMVLHVTSMCCGIKLR-TICFVIAYLHLVSCVLDI----AFHLLTVAIV 373
           L+A++ I  +   VL V ++     LR +  F++  LH V+C +D+     F + +  + 
Sbjct: 6   LKALMCIWGIFWNVLIVAAILKDRVLRNSSTFLLLSLHFVACTVDVGSRLVFDVPSEILN 65

Query: 374 TDGFQCDVNYDKF 412
              F+  VNYD F
Sbjct: 66  RPLFRLSVNYDDF 78


>Z81479-9|CAE17735.1|  215|Caenorhabditis elegans Hypothetical
           protein C34F6.11 protein.
          Length = 215

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 144 FVCFDLYIQSTIKLLLWVCVVNCVQFFQLETFSQWFYTSLACAVESNYALYVS-SSLICI 320
           F C+ +YI     LL +V  V C   F L  +   FYT + C  E+   +++  ++LI  
Sbjct: 59  FFCYSVYINFIFALLAFVGGVLC---FTLGLYYSTFYTRINC--ENGINIWIPLNNLIAT 113

Query: 321 W 323
           W
Sbjct: 114 W 114


>AL023856-3|CAA19562.2|  335|Caenorhabditis elegans Hypothetical
           protein Y94A7B.6 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
 Frame = +2

Query: 218 VLSIGNVLTMVLHVTSMCCGI-----KLRTICFVIAYLHLVSCVLDIAFHLLTVAIVTDG 382
           +L I +  ++ +H+   CC +      ++++ + +  LH  S  LD     L+++++   
Sbjct: 15  ILYITSAFSLPIHIFGGCCILCKTPTAMKSVKWALFNLHFWSASLD-----LSISLLAQP 69

Query: 383 FQCDVNYDKFSAIPWAVVEPLLLVLNLG 466
           F C   +  FS   W ++    +V +LG
Sbjct: 70  FMCTPAFAGFSLGIWGLIGVPTVVWSLG 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,415,923
Number of Sequences: 27780
Number of extensions: 477121
Number of successful extensions: 1240
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)