Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B18
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ...    30   2.6  
Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    29   3.5  

>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
            protein D1007.15 protein.
          Length = 1184

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 190  LQFRVLRLKRIPLSTQRTKYVVNIYVFGLYCDHSAGF 300
            L+F   RL ++ LST+  ++++ + +  +YC  S+ F
Sbjct: 1053 LEFNETRLGQVSLSTETIRHIIGLQITVIYCVLSSSF 1089


>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +2

Query: 566 SGNKPIICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSXDTTCAITEDDTEVHAYI 733
           + N P + A  T  A   Y P+  + ++++    C CS   TC  T    +VH++I
Sbjct: 134 ASNLPFVTAYVTYLAAFFYFPLKFLYESDLK---CACSFIITCETTRIAMKVHSFI 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,237,997
Number of Sequences: 27780
Number of extensions: 362158
Number of successful extensions: 799
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)