Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B17
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.44 
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    27   1.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   5.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.44
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 751 PPPPPXXXPPPPP 789
           PPPPP   PPP P
Sbjct: 585 PPPPPPMGPPPSP 597



 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 730 PXXXKNXPPPPPXXXPPPPP 789
           P    N P   P   PPPPP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPP 589



 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 730 PXXXKNXPPPPPXXXPPPPP 789
           P      PPP P   PPPPP
Sbjct: 574 PNLPNAQPPPAP---PPPPP 590


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 64  SRYLIIISCTRNIIKRKNVLPYQXXSV 144
           +R  +I+ CTRN+   +N +PY+   V
Sbjct: 115 ARPSMIVKCTRNVCTGRNEVPYREQCV 141


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 745 NXPPPPPXXXPPP 783
           N PPPPP   P P
Sbjct: 374 NQPPPPPYQPPQP 386


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,432
Number of Sequences: 2352
Number of extensions: 9472
Number of successful extensions: 75
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)