Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B16
(892 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08574 Cluster: Cytochrome c1 heme protein, mitochondri... 96 1e-18
UniRef50_P07143 Cluster: Cytochrome c1, heme protein, mitochondr... 93 1e-17
UniRef50_A7P7Q4 Cluster: Chromosome chr9 scaffold_7, whole genom... 84 5e-15
UniRef50_Q18853 Cluster: Putative uncharacterized protein cyc-1;... 81 3e-14
UniRef50_UPI0000DB762B Cluster: PREDICTED: similar to CG4769-PA;... 78 3e-13
UniRef50_Q9VAM8 Cluster: CG14508-PA; n=4; Bilateria|Rep: CG14508... 77 6e-13
UniRef50_P25076 Cluster: Cytochrome c1 heme protein, mitochondri... 77 6e-13
UniRef50_UPI0001554D79 Cluster: PREDICTED: similar to cytochrome... 72 2e-11
UniRef50_P20114 Cluster: Cytochrome c1 heme protein; n=1; Euglen... 65 2e-09
UniRef50_Q4FPG7 Cluster: Ubiquinol-cytochrome-c reductase; n=3; ... 61 4e-08
UniRef50_Q8FZE4 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 60 6e-08
UniRef50_Q6N0B8 Cluster: Cytochrome C1; n=2; Magnetospirillum gr... 60 6e-08
UniRef50_Q4N2G5 Cluster: Cytochrome c1, putative; n=3; Apicomple... 58 2e-07
UniRef50_A7ATE9 Cluster: Cytochrome C1 protein, putative; n=7; A... 56 1e-06
UniRef50_P13627 Cluster: Cytochrome c1 precursor; n=8; Bacteria|... 56 1e-06
UniRef50_Q9ZDQ4 Cluster: CYTOCHROME C1, HEME PROTEIN; n=15; Rick... 56 2e-06
UniRef50_Q2GDE1 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 56 2e-06
UniRef50_UPI00015B54BE Cluster: PREDICTED: similar to transmembr... 54 5e-06
UniRef50_Q0ARQ6 Cluster: Cytochrome c1 precursor; n=1; Maricauli... 54 5e-06
UniRef50_Q0C5B1 Cluster: Putative ubiquinol-cytochrome c reducta... 53 9e-06
UniRef50_Q4QIT8 Cluster: Cytochrome c1, heme protein, mitochondr... 52 1e-05
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 51 3e-05
UniRef50_A7HVC5 Cluster: Cytochrome c1 precursor; n=1; Parvibacu... 48 3e-04
UniRef50_Q9AAW8 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 48 4e-04
UniRef50_Q4E7X7 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 48 4e-04
UniRef50_Q02760 Cluster: Cytochrome c1 precursor; n=13; Rhodobac... 48 4e-04
UniRef50_A0L4I9 Cluster: Cytochrome c1 precursor; n=1; Magnetoco... 47 6e-04
UniRef50_Q1GTG5 Cluster: Cytochrome c1 precursor; n=5; Sphingomo... 46 0.001
UniRef50_Q5NNX8 Cluster: Cytochrome c1; n=1; Zymomonas mobilis|R... 46 0.002
UniRef50_A3VTP6 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 44 0.004
UniRef50_Q1GCS2 Cluster: Cytochrome c1; n=10; Alphaproteobacteri... 44 0.005
UniRef50_P81379 Cluster: Cytochrome c1 precursor; n=1; Blastochl... 44 0.005
UniRef50_A3WER2 Cluster: Cytochrome c1, heme protein; n=2; Eryth... 43 0.012
UniRef50_Q5FTF1 Cluster: Ubiquinol-cytochrome-c reductase; n=1; ... 39 0.15
UniRef50_A5G2Q4 Cluster: Cytochrome c1 precursor; n=1; Acidiphil... 38 0.26
UniRef50_UPI0000F32E9C Cluster: UPI0000F32E9C related cluster; n... 34 5.6
UniRef50_Q336T6 Cluster: Expressed protein; n=2; Oryza sativa (j... 33 9.8
UniRef50_Q550T0 Cluster: TRAM, LAG1 and CLN8 homology domain-con... 33 9.8
>UniRef50_P08574 Cluster: Cytochrome c1 heme protein, mitochondrial
precursor; n=45; Eukaryota|Rep: Cytochrome c1 heme
protein, mitochondrial precursor - Homo sapiens (Human)
Length = 325
Score = 95.9 bits (228), Expect = 1e-18
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -3
Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQ 672
G Y F+ LTG S G P A MA + + E+ DGTPA SQ
Sbjct: 206 GGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIAMAPPIYTDVLEFDDGTPATMSQ 265
Query: 671 LAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
+AKDV T L+W SEPE D R++M +K + M ++L +V KRHKWS LK RK AY+P
Sbjct: 266 IAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323
>UniRef50_P07143 Cluster: Cytochrome c1, heme protein, mitochondrial
precursor; n=42; Eukaryota|Rep: Cytochrome c1, heme
protein, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 309
Score = 92.7 bits (220), Expect = 1e-17
Identities = 40/94 (42%), Positives = 59/94 (62%)
Frame = -3
Query: 779 GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMT 600
G+ P G+ MA+V FD+ EY DGTPA SQ+AKDV T L WC+EPE D+R+++
Sbjct: 211 GSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLG 270
Query: 599 IKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
+K + + S L + + K+ KW+ +K RK + P
Sbjct: 271 LKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNP 304
Score = 43.2 bits (97), Expect = 0.009
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -1
Query: 883 PPXLXLICSGXKGGEXTXSRY*LVHG----PPAGVVLREGQNYNPYFPGG 746
PP L LI GG + L+ G PPAGV L G NYNPYFPGG
Sbjct: 174 PPDLSLIVKARHGG--CDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGG 221
>UniRef50_A7P7Q4 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 421
Score = 83.8 bits (198), Expect = 5e-15
Identities = 45/109 (41%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = -3
Query: 836 YXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKD 660
Y FA LTG S G P GA M ++ D A EY DGTPA +Q+ KD
Sbjct: 306 YVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPKMLIDGAVEYEDGTPATEAQMGKD 365
Query: 659 VATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRK 513
V T L W +EPE+++R+ M K I + S+ YY+R KWS K RK
Sbjct: 366 VVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSIFKSRK 414
>UniRef50_Q18853 Cluster: Putative uncharacterized protein cyc-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cyc-1 - Caenorhabditis elegans
Length = 285
Score = 81.4 bits (192), Expect = 3e-14
Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = -3
Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQ 672
G Y F+ LTG + G P G M Q FDE EY DGTPA SQ
Sbjct: 158 GGDDYVFSLLTGYLEAPAGVKVDDGKAYNPYFPGGIISMPQQLFDEGIEYKDGTPATMSQ 217
Query: 671 LAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKPV 495
AKDV+ + W +EP D R++ +K + +A V+ Y KRH WS K +K +K V
Sbjct: 218 QAKDVSAFMHWAAEPFHDTRKKWALKIAALIPFVAVVLIYGKRHIWSFTKSQKFLFKTV 276
>UniRef50_UPI0000DB762B Cluster: PREDICTED: similar to CG4769-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG4769-PA
- Apis mellifera
Length = 351
Score = 77.8 bits (183), Expect = 3e-13
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = -3
Query: 836 YXFAXLTGTWTS--CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAK 663
Y F+ LTG W + + P G M Q+ + A +Y D TPA ASQ+AK
Sbjct: 150 YVFSLLTG-WMDPPAGVESEENQYFNAYFPGGRTTMPQMLMEGAVDYDDDTPATASQMAK 208
Query: 662 DVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
DV L W + E D R+ MT+K IG+F +L Y R WS ++ R+ AY P
Sbjct: 209 DVVEFLMWTASSEHDTRKIMTLKCIGIFLILMVSTFYIYRRTWSHVRSRRIAYVP 263
>UniRef50_Q9VAM8 Cluster: CG14508-PA; n=4; Bilateria|Rep: CG14508-PA
- Drosophila melanogaster (Fruit fly)
Length = 344
Score = 77.0 bits (181), Expect = 6e-13
Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = -3
Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSD-GTPAXAS 675
G Y F+ LTG + G GA M +V +E + D PA A+
Sbjct: 190 GGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAA 249
Query: 674 QLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
Q+AKDV LKW SEPE D+RR + IK + + L + Y KR KWSTLK RK + P
Sbjct: 250 QIAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIP 308
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/50 (50%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 886 YPPXLXLICSGXKGGEXTXSRY*LVHG---PPAGVVLREGQNYNPYFPGG 746
YPP L I S KGGE + L+ G PPAG LR+G +NPYF GG
Sbjct: 177 YPPDLSYIVSARKGGEDYV--FSLLTGYCDPPAGFALRDGLYFNPYFSGG 224
>UniRef50_P25076 Cluster: Cytochrome c1 heme protein, mitochondrial
precursor; n=12; Viridiplantae|Rep: Cytochrome c1 heme
protein, mitochondrial precursor - Solanum tuberosum
(Potato)
Length = 320
Score = 77.0 bits (181), Expect = 6e-13
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = -3
Query: 836 YXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKD 660
Y FA LT S G P GA M ++ D A EY DG PA +Q+ KD
Sbjct: 205 YVFALLTAYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGIPATEAQMGKD 264
Query: 659 VATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRK 513
V + L W +EPE+++R+ M K I + S+ YY+R +WS LK RK
Sbjct: 265 VVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRK 313
>UniRef50_UPI0001554D79 Cluster: PREDICTED: similar to cytochrome
c1, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to cytochrome c1, partial -
Ornithorhynchus anatinus
Length = 570
Score = 71.7 bits (168), Expect = 2e-11
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = -3
Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQ 672
G Y F+ LTG S G P A MA ++E E+ DGTPA SQ
Sbjct: 2 GGEDYVFSLLTGYCDPPTGVSLREGLYFNPYFPGQAIGMAPPIYNEVLEFDDGTPATMSQ 61
Query: 671 LAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKPVF 492
+AKDV T L+W +EPE D R++M +K + + S+L ++ + K + LK R P F
Sbjct: 62 VAKDVCTFLRWAAEPEHDARKRMGLKMLVLISLLLPLISHIKHVRKLELKTRPGVV-PHF 120
Query: 491 KK*TP 477
++ P
Sbjct: 121 RRKRP 125
>UniRef50_P20114 Cluster: Cytochrome c1 heme protein; n=1; Euglena
gracilis|Rep: Cytochrome c1 heme protein - Euglena
gracilis
Length = 243
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = -3
Query: 749 GAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSML 570
G M D+ EY DGTPA Q+AKDV L+WCS P D+R+ + K I +++
Sbjct: 155 GIIGMPPPLTDDMIEYEDGTPASVPQMAKDVTCFLEWCSNPWWDERKLLGYKTIATLAVI 214
Query: 569 AAVV*YYKRHKWSTLKFRKXAYKP 498
A YY R + R+ A++P
Sbjct: 215 AVSSGYYNRFLSGLWRSRRLAFRP 238
>UniRef50_Q4FPG7 Cluster: Ubiquinol-cytochrome-c reductase; n=3;
Bacteria|Rep: Ubiquinol-cytochrome-c reductase -
Pelagibacter ubique
Length = 259
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = -3
Query: 737 MAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV 558
MA+ D EYSDGT A Q+AKDV T L W +EP L+ R +M KAI +L +V
Sbjct: 185 MAEPLSDGLVEYSDGTTASKEQMAKDVTTFLMWAAEPHLESRHKMGFKAILYLIILTILV 244
Query: 557 *YYKRHKWSTLK 522
+ + WS ++
Sbjct: 245 YFSMKKIWSRIE 256
>UniRef50_Q8FZE4 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1, putative; n=17; Rhizobiales|Rep:
Ubiquinol-cytochrome c reductase, cytochrome c1,
putative - Brucella suis
Length = 295
Score = 60.5 bits (140), Expect = 6e-08
Identities = 29/75 (38%), Positives = 40/75 (53%)
Frame = -3
Query: 746 AXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLA 567
A MA+ DE Y DGTP Q A+DV+ L W +EP L+DR++ + I + A
Sbjct: 220 ALAMAKPLSDEQVTYEDGTPETVDQYARDVSAFLMWAAEPHLEDRKKTGFRVIVFLVLFA 279
Query: 566 AVV*YYKRHKWSTLK 522
+V KR WS +K
Sbjct: 280 GLVYIAKRSIWSDVK 294
>UniRef50_Q6N0B8 Cluster: Cytochrome C1; n=2; Magnetospirillum
gryphiswaldense|Rep: Cytochrome C1 - Magnetospirillum
gryphiswaldense
Length = 537
Score = 60.5 bits (140), Expect = 6e-08
Identities = 29/85 (34%), Positives = 43/85 (50%)
Frame = -3
Query: 779 GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMT 600
G + P A M ++ YSDGT A QLA+DV L W +EPEL++R+ M
Sbjct: 452 GKYYNTYFPGNAIGMPPQLMEDLITYSDGTKASPEQLARDVTAFLNWAAEPELNERKSMG 511
Query: 599 IKAIGMFSMLAAVV*YYKRHKWSTL 525
+K + ++ A++ KR W L
Sbjct: 512 LKVMIFLAVFTALLYALKRQIWKNL 536
Score = 33.1 bits (72), Expect = 9.8
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -1
Query: 883 PPXLXLICSGXKGGEXTXSRY*LVHG----PPAGVVLREGQNYNPYFPG 749
PP L L+ GG Y L+ G P GVV+ EG+ YN YFPG
Sbjct: 415 PPDLSLMAKARVGGPNYI--YSLMLGFKEEAPHGVVIPEGKYYNTYFPG 461
>UniRef50_Q4N2G5 Cluster: Cytochrome c1, putative; n=3;
Apicomplexa|Rep: Cytochrome c1, putative - Theileria
parva
Length = 396
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = -3
Query: 779 GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMT 600
G + G+ MA D E+ DGTPA SQ+AKDVA + W S+P D+R+ +
Sbjct: 298 GLHFNNYFNGGSISMAPPLEDGMLEFEDGTPATVSQMAKDVANFITWTSDPMHDERKNLF 357
Query: 599 IKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKPVFK 489
K ++ A VV + R W+ + +K + K
Sbjct: 358 FKFFAGSTLCAIVVSMWYRFFWAHFATMRWDFKKLTK 394
>UniRef50_A7ATE9 Cluster: Cytochrome C1 protein, putative; n=7;
Aconoidasida|Rep: Cytochrome C1 protein, putative -
Babesia bovis
Length = 397
Score = 56.0 bits (129), Expect = 1e-06
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = -3
Query: 836 YXFAXLTGTWTSCWCSAT*GTELQSIL------PRGAXXMAQVXFDEAAEYSDGTPAXAS 675
Y FA LTG +C G EL+ L G+ M D EY DGTPA S
Sbjct: 279 YLFALLTG-----YCDPPEGIELRQGLYFNTYFTGGSIAMPPPLEDGMVEYEDGTPATVS 333
Query: 674 QLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAV 561
Q+AKDV + + W S+P D+R+ M +K I + S+L V
Sbjct: 334 QMAKDVVSFITWASDPMHDERKNMGMKLI-LGSVLGTV 370
>UniRef50_P13627 Cluster: Cytochrome c1 precursor; n=8;
Bacteria|Rep: Cytochrome c1 precursor - Paracoccus
denitrificans
Length = 450
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = -3
Query: 737 MAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV 558
MA D+ Y DGTPA Q+A DVA L W +EP++ DR+Q+ ++ +LAA++
Sbjct: 373 MAAPLSDDQVTYEDGTPATVDQMATDVAAFLMWTAEPKMMDRKQVGFVSVIFLIVLAALL 432
Query: 557 *YYKRHKWSTLK 522
+ W +K
Sbjct: 433 YLTNKKLWQPIK 444
>UniRef50_Q9ZDQ4 Cluster: CYTOCHROME C1, HEME PROTEIN; n=15;
Rickettsiales|Rep: CYTOCHROME C1, HEME PROTEIN -
Rickettsia prowazekii
Length = 253
Score = 55.6 bits (128), Expect = 2e-06
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = -3
Query: 836 YXFAXLTG-TWTSCWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKD 660
Y ++ LT T + GT P M D Y DGT A Q++KD
Sbjct: 148 YIYSLLTSYTEPPAYFKMMHGTYYNPYFPGAQIAMPPPLTDGQVTYMDGTNASVEQMSKD 207
Query: 659 VATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHK-WSTLK 522
V L+W +EPE++ R+ M +K + MF ++ ++ Y +++ WS +K
Sbjct: 208 VTVFLQWAAEPEMEHRKSMGLKVM-MFLIVFTILFYIAKNRIWSNVK 253
>UniRef50_Q2GDE1 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: Ubiquinol-cytochrome c reductase,
cytochrome c1 - Neorickettsia sennetsu (strain Miyayama)
Length = 256
Score = 55.6 bits (128), Expect = 2e-06
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = -3
Query: 749 GAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSML 570
G MA ++ Y DGTPA Q+A DV L+W SE E++ R+++ +K +G S+L
Sbjct: 173 GKIAMAPPLSEDIVSYEDGTPATVEQMAFDVVNFLQWASEYEMEHRKRLGLKVMGFLSIL 232
Query: 569 AAVV*YYKRHKWSTLK 522
+ + W +K
Sbjct: 233 LVLSWVSNKRIWKDIK 248
>UniRef50_UPI00015B54BE Cluster: PREDICTED: similar to transmembrane
and tetratricopeptide repeat containing 4; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to transmembrane and
tetratricopeptide repeat containing 4 - Nasonia
vitripennis
Length = 1262
Score = 54.0 bits (124), Expect = 5e-06
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -3
Query: 842 RXYXFAXLTG-TWTSCWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLA 666
R Y F LTG T G G+ MA++ D +Y DGTPA SQ+A
Sbjct: 475 RDYVFGLLTGYTEPPAGVELRDGQAFNPYFEGGSIGMAEMLQDGLVDYDDGTPAYKSQMA 534
Query: 665 KDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV 558
KDV L W S + D R+ + K + + +L A +
Sbjct: 535 KDVVEFLVWTSNQDWDCRKLLCFKGVCIGFLLVASI 570
>UniRef50_Q0ARQ6 Cluster: Cytochrome c1 precursor; n=1; Maricaulis
maris MCS10|Rep: Cytochrome c1 precursor - Maricaulis
maris (strain MCS10)
Length = 269
Score = 54.0 bits (124), Expect = 5e-06
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = -3
Query: 749 GAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSML 570
GA MA + EY+DGT A Q+A+DV T L W +P ++ R+QM + +
Sbjct: 193 GAIAMAPPLAEGIIEYADGTEATVEQMAEDVTTFLSWAGDPHMETRKQMGAMVLIFLLIF 252
Query: 569 AAVV*YYKRHKWSTLK 522
A +V R W+ +K
Sbjct: 253 AILVYLAYRQVWANVK 268
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 886 YPPXLXLICSGXKGGEXTXSRY*LVHG---PPAGVVLREGQNYNPYFPGG 746
YPP L LI GGE Y L+ G P L GQ YNPYF GG
Sbjct: 146 YPPDLSLIVKARTGGENYL--YSLLTGYEDAPEDSHLAAGQYYNPYFAGG 193
>UniRef50_Q0C5B1 Cluster: Putative ubiquinol-cytochrome c reductase,
cytochrome c1; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Putative ubiquinol-cytochrome c reductase, cytochrome c1
- Hyphomonas neptunium (strain ATCC 15444)
Length = 319
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = -3
Query: 755 PRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFS 576
P G MA D EY+DGT A A Q+A DVA L W SEP+L+ R++ + +
Sbjct: 241 PGGFLAMAPQLTDGRVEYTDGTEATAEQMAYDVAQFLAWASEPKLEARKRTGLATMAFLL 300
Query: 575 MLAAVV*YYKRHKW 534
+L ++ + + W
Sbjct: 301 ILTTLLWFSYKQIW 314
>UniRef50_Q4QIT8 Cluster: Cytochrome c1, heme protein,
mitochondrial, putative; n=7; Kinetoplastida|Rep:
Cytochrome c1, heme protein, mitochondrial, putative -
Leishmania major
Length = 258
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = -3
Query: 719 DEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YY--K 546
D +Y DGTPA SQ+AKDV L+W +E E DDRR K I ++ ++ +Y K
Sbjct: 180 DGLVDYEDGTPATISQMAKDVVNFLRWSAESEYDDRRVAFWKVITTVGLVNCLLLHYGQK 239
Query: 545 RHKW 534
W
Sbjct: 240 NTNW 243
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = -3
Query: 779 GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMT 600
G+ P A M + D Y DG+PA +Q +KDV T L W +EP ++ R+++
Sbjct: 602 GSYYNKYFPGHAIKMPKPLSDGQVTYDDGSPATVAQYSKDVTTFLMWTAEPHMEARKRLG 661
Query: 599 IKAIGMFSMLAAVV*YYKRHKWS 531
+ + A ++ + K+ W+
Sbjct: 662 FQVFVFLIIFAGLMYFTKKKVWA 684
>UniRef50_A7HVC5 Cluster: Cytochrome c1 precursor; n=1; Parvibaculum
lavamentivorans DS-1|Rep: Cytochrome c1 precursor -
Parvibaculum lavamentivorans DS-1
Length = 262
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = -3
Query: 719 DEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRH 540
D +Y DGTP Q+AKDV + W +EP+L+ R +M + + L ++ + R
Sbjct: 197 DGQVDYEDGTPNTVDQMAKDVTHFMMWTAEPKLEQRHRMGFQVLLYLVALTGILYFTMRK 256
Query: 539 KWS 531
W+
Sbjct: 257 VWA 259
>UniRef50_Q9AAW8 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=2; Caulobacter|Rep:
Ubiquinol-cytochrome c reductase, cytochrome c1 -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 281
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = -3
Query: 767 QSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAI 588
+ + P G MAQ D + DGT + Q AKDV+ L W +EP+L+ R+Q T A+
Sbjct: 199 EKVPPGGFIAMAQPLKDGQVTFDDGTKSTLDQQAKDVSAFLMWAAEPKLEQRKQ-TGFAV 257
Query: 587 GMFSMLAAVV*Y--YKR 543
++ +L + + Y YKR
Sbjct: 258 IIYLLLLSGLLYASYKR 274
>UniRef50_Q4E7X7 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=11; Rickettsiales|Rep:
Ubiquinol-cytochrome c reductase, cytochrome c1 -
Wolbachia endosymbiont of Drosophila simulans
Length = 375
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = -3
Query: 764 SILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIG 585
S P G MA + EY A +A DV L+W +EPEL+ R ++ +K +
Sbjct: 292 SYFPTGRLAMAPPLSEGMVEYDGARQATVENMAYDVINFLQWAAEPELERRHKLGLKVVA 351
Query: 584 MFSMLAAVV*YYKRHKWSTLKFRK 513
F +L WS L +K
Sbjct: 352 YFIILTVFFVLTNNKVWSKLYKKK 375
>UniRef50_Q02760 Cluster: Cytochrome c1 precursor; n=13;
Rhodobacteraceae|Rep: Cytochrome c1 precursor -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 285
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = -3
Query: 719 DEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRH 540
D+ EY+DG A +A+DV+ L W +EP+L R+Q A+ ++L+ ++ +
Sbjct: 213 DDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKR 272
Query: 539 KWSTLKFRK 513
W+ +K +K
Sbjct: 273 LWAGVKGKK 281
>UniRef50_A0L4I9 Cluster: Cytochrome c1 precursor; n=1;
Magnetococcus sp. MC-1|Rep: Cytochrome c1 precursor -
Magnetococcus sp. (strain MC-1)
Length = 277
Score = 47.2 bits (107), Expect = 6e-04
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -3
Query: 707 EYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*Y-YKRHKWS 531
EY+DGT A Q AKDV L W SEP L ++R+ T K + ++ +L + Y KR WS
Sbjct: 216 EYADGTKATLEQQAKDVTAFLAWASEPNL-EKRKATGKYVILYLLLLTGMLYAVKRRIWS 274
Query: 530 TL 525
+
Sbjct: 275 RI 276
>UniRef50_Q1GTG5 Cluster: Cytochrome c1 precursor; n=5;
Sphingomonadales|Rep: Cytochrome c1 precursor -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 269
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/86 (31%), Positives = 37/86 (43%)
Frame = -3
Query: 779 GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMT 600
G P MA+ D Y+DGT A Q+AKDV L W +EP+L R Q+
Sbjct: 183 GLHYNPYFPNLNLAMAKPLSDGQVTYADGTRATVDQMAKDVTAFLVWTAEPKLVKRVQVG 242
Query: 599 IKAIGMFSMLAAVV*YYKRHKWSTLK 522
IG + + R+ W+ K
Sbjct: 243 WAVIGFLLIFTVLTYLSYRNIWADKK 268
>UniRef50_Q5NNX8 Cluster: Cytochrome c1; n=1; Zymomonas mobilis|Rep:
Cytochrome c1 - Zymomonas mobilis
Length = 279
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = -3
Query: 719 DEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAI 588
+ EY DGT A Q+AKDV L W +EPEL+ R ++ + I
Sbjct: 215 ENQVEYKDGTKASTDQMAKDVTAFLAWSAEPELESRHRIGLGVI 258
>UniRef50_A3VTP6 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=1; Parvularcula bermudensis
HTCC2503|Rep: Ubiquinol-cytochrome c reductase,
cytochrome c1 - Parvularcula bermudensis HTCC2503
Length = 319
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -3
Query: 749 GAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSML 570
G MA + Y DG+P Q AKD+ L W SEP+L+ R+ I +
Sbjct: 244 GVFKMAAPLSEGVVTYEDGSPETVEQYAKDITAFLTWASEPKLEQRKAQGRFVILYLVIF 303
Query: 569 AAVV*YYKRHKW 534
A +V R W
Sbjct: 304 ATIVYLSYRQIW 315
>UniRef50_Q1GCS2 Cluster: Cytochrome c1; n=10;
Alphaproteobacteria|Rep: Cytochrome c1 - Silicibacter
sp. (strain TM1040)
Length = 263
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/81 (28%), Positives = 39/81 (48%)
Frame = -3
Query: 755 PRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFS 576
P G MA DE E+ DG L+KDV+ L W +EP++ R+Q + +
Sbjct: 181 PGGWISMAPPLADEQVEFIDGHENDLENLSKDVSAFLMWTAEPKMMARKQAGFVGVLFLT 240
Query: 575 MLAAVV*YYKRHKWSTLKFRK 513
+L+ ++ + W+ K +K
Sbjct: 241 VLSVLLYLTNKRLWAPHKGKK 261
>UniRef50_P81379 Cluster: Cytochrome c1 precursor; n=1;
Blastochloris viridis|Rep: Cytochrome c1 precursor -
Rhodopseudomonas viridis
Length = 282
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/86 (29%), Positives = 36/86 (41%)
Frame = -3
Query: 779 GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMT 600
G+ P M D Y DGTP Q +KDVA L W +EP LD R+++
Sbjct: 193 GSFYNKYFPGHIIGMTPPIADGLVTYGDGTPETQLQYSKDVAAFLMWAAEPTLDVRKRIG 252
Query: 599 IKAIGMFSMLAAVV*YYKRHKWSTLK 522
+G + ++ K W +K
Sbjct: 253 WWVLGFLVIFTGLLVATKIVVWRPVK 278
>UniRef50_A3WER2 Cluster: Cytochrome c1, heme protein; n=2;
Erythrobacter|Rep: Cytochrome c1, heme protein -
Erythrobacter sp. NAP1
Length = 284
Score = 42.7 bits (96), Expect = 0.012
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 719 DEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYK-R 543
D YSDGT A Q++ DV L W EP L R+Q IG F + A ++ + +
Sbjct: 216 DGIVSYSDGTEATTEQMSADVTAFLTWAGEPSLIKRKQTGWFVIG-FLLFATILGFLSYK 274
Query: 542 HKWSTLK 522
W+T K
Sbjct: 275 TVWATKK 281
>UniRef50_Q5FTF1 Cluster: Ubiquinol-cytochrome-c reductase; n=1;
Gluconobacter oxydans|Rep: Ubiquinol-cytochrome-c
reductase - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 230
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -3
Query: 719 DEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRH 540
D Y DGTPA ++Q+A DV+ L + P RR++ + + +++A + +R
Sbjct: 165 DGMLTYPDGTPATSAQMAGDVSAFLDGVAHPHQAKRRRIGVYVLAYLALMALLTFLLQRR 224
Query: 539 KW 534
W
Sbjct: 225 IW 226
>UniRef50_A5G2Q4 Cluster: Cytochrome c1 precursor; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome c1 precursor - Acidiphilium
cryptum (strain JF-5)
Length = 243
Score = 38.3 bits (85), Expect = 0.26
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 755 PRGAXXMAQVXFDEAAEYSDGTPAXASQLAKDVATXLKWCSEPELDDRRQMTIKAI 588
P G M + +DG A+Q+A DVA L W ++P+L+DR+ + AI
Sbjct: 169 PGGQIAMPPALKPGSVTLADGKQPDAAQMAHDVAEFLAWTADPKLEDRKVSGLGAI 224
>UniRef50_UPI0000F32E9C Cluster: UPI0000F32E9C related cluster; n=1;
Bos taurus|Rep: UPI0000F32E9C UniRef100 entry - Bos
Taurus
Length = 264
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = -1
Query: 622 WTTVGR*PSKLSACSPCLPPLSNTTSGTSGPRSSLEXXPTSP 497
WT V S LS SPC P S T+GP L P SP
Sbjct: 12 WTPVPHPVSSLSPNSPCPPHHSRAAETTTGPPGPLPQLPRSP 53
>UniRef50_Q336T6 Cluster: Expressed protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice)
Length = 284
Score = 33.1 bits (72), Expect = 9.8
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 634 EHHFXK--VATSLASCDAXAGVPSLYSAASSNXTCAIXMAPLGSMDCNSVPHVALHQQEV 807
EHH V+T L CDA AG P + AAS+ + +G + +S+P+ H
Sbjct: 203 EHHLPAAYVSTVLWLCDAAAGDP--WIAASAREVAGVGAVAVGCLALSSLPYSGRHHSSP 260
Query: 808 HVPVSXA 828
P+ A
Sbjct: 261 PPPLRPA 267
>UniRef50_Q550T0 Cluster: TRAM, LAG1 and CLN8 homology
domain-containing protein; n=2; Dictyostelium
discoideum|Rep: TRAM, LAG1 and CLN8 homology
domain-containing protein - Dictyostelium discoideum AX4
Length = 258
Score = 33.1 bits (72), Expect = 9.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 407 LTCYCAYXKKKFV*NICXATCKLXAFI 487
L+CYC Y KK +V N +TC L FI
Sbjct: 67 LSCYCIYNKKSWVTNEMTSTCALSDFI 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,316,651
Number of Sequences: 1657284
Number of extensions: 10953805
Number of successful extensions: 22118
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 21227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22089
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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