Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B16
         (892 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p pro...   111   9e-25
AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA ...   111   9e-25
AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p pro...    77   3e-14
AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-P...    77   3e-14

>AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p
           protein.
          Length = 307

 Score =  111 bits (268), Expect = 9e-25
 Identities = 58/118 (49%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
 Frame = -3

Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQ 672
           G   Y F+ LTG   +        G       P GA  MAQV ++E  EY DGTP   SQ
Sbjct: 187 GGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQ 246

Query: 671 LAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
           LAKDVAT LKW SEPE DDR+Q+ IK IG+   L  +  Y KRHKWS+LK RK  + P
Sbjct: 247 LAKDVATFLKWTSEPEHDDRKQLLIKVIGILGFLTVISYYIKRHKWSSLKSRKIVFVP 304



 Score = 56.4 bits (130), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -1

Query: 886 YPPXLXLICSGXKGGE-XTXSRY*LVHGPPAGVVLREGQNYNPYFPGG 746
           YPP L  I S  KGGE    S     H  PAGVVLREGQ +NPYFPGG
Sbjct: 174 YPPDLSYIVSARKGGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPGG 221


>AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA
           protein.
          Length = 307

 Score =  111 bits (268), Expect = 9e-25
 Identities = 58/118 (49%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
 Frame = -3

Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQ 672
           G   Y F+ LTG   +        G       P GA  MAQV ++E  EY DGTP   SQ
Sbjct: 187 GGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQ 246

Query: 671 LAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
           LAKDVAT LKW SEPE DDR+Q+ IK IG+   L  +  Y KRHKWS+LK RK  + P
Sbjct: 247 LAKDVATFLKWTSEPEHDDRKQLLIKVIGILGFLTVISYYIKRHKWSSLKSRKIVFVP 304



 Score = 56.4 bits (130), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -1

Query: 886 YPPXLXLICSGXKGGE-XTXSRY*LVHGPPAGVVLREGQNYNPYFPGG 746
           YPP L  I S  KGGE    S     H  PAGVVLREGQ +NPYFPGG
Sbjct: 174 YPPDLSYIVSARKGGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPGG 221


>AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p
           protein.
          Length = 344

 Score = 77.0 bits (181), Expect = 3e-14
 Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
 Frame = -3

Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSD-GTPAXAS 675
           G   Y F+ LTG        +   G         GA  M +V  +E   + D   PA A+
Sbjct: 190 GGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAA 249

Query: 674 QLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
           Q+AKDV   LKW SEPE D+RR + IK   + + L  +  Y KR KWSTLK RK  + P
Sbjct: 250 QIAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIP 308



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 25/50 (50%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -1

Query: 886 YPPXLXLICSGXKGGEXTXSRY*LVHG---PPAGVVLREGQNYNPYFPGG 746
           YPP L  I S  KGGE     + L+ G   PPAG  LR+G  +NPYF GG
Sbjct: 177 YPPDLSYIVSARKGGEDYV--FSLLTGYCDPPAGFALRDGLYFNPYFSGG 224


>AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-PA
           protein.
          Length = 344

 Score = 77.0 bits (181), Expect = 3e-14
 Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
 Frame = -3

Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSD-GTPAXAS 675
           G   Y F+ LTG        +   G         GA  M +V  +E   + D   PA A+
Sbjct: 190 GGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAA 249

Query: 674 QLAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKP 498
           Q+AKDV   LKW SEPE D+RR + IK   + + L  +  Y KR KWSTLK RK  + P
Sbjct: 250 QIAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIP 308



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 25/50 (50%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -1

Query: 886 YPPXLXLICSGXKGGEXTXSRY*LVHG---PPAGVVLREGQNYNPYFPGG 746
           YPP L  I S  KGGE     + L+ G   PPAG  LR+G  +NPYF GG
Sbjct: 177 YPPDLSYIVSARKGGEDYV--FSLLTGYCDPPAGFALRDGLYFNPYFSGG 224


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,452,755
Number of Sequences: 53049
Number of extensions: 554416
Number of successful extensions: 1253
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)