Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B16
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical pr...    81   8e-16
Z81575-9|CAB04635.1|  130|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81142-12|CAI58637.1|  192|Caenorhabditis elegans Hypothetical p...    28   7.8  
AL023813-3|CAI58661.1|  192|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical
           protein C54G4.8 protein.
          Length = 285

 Score = 81.4 bits (192), Expect = 8e-16
 Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
 Frame = -3

Query: 848 GRRXYXFAXLTGTWTS-CWCSAT*GTELQSILPRGAXXMAQVXFDEAAEYSDGTPAXASQ 672
           G   Y F+ LTG   +        G       P G   M Q  FDE  EY DGTPA  SQ
Sbjct: 158 GGDDYVFSLLTGYLEAPAGVKVDDGKAYNPYFPGGIISMPQQLFDEGIEYKDGTPATMSQ 217

Query: 671 LAKDVATXLKWCSEPELDDRRQMTIKAIGMFSMLAAVV*YYKRHKWSTLKFRKXAYKPV 495
            AKDV+  + W +EP  D R++  +K   +   +A V+ Y KRH WS  K +K  +K V
Sbjct: 218 QAKDVSAFMHWAAEPFHDTRKKWALKIAALIPFVAVVLIYGKRHIWSFTKSQKFLFKTV 276


>Z81575-9|CAB04635.1|  130|Caenorhabditis elegans Hypothetical
           protein R08H2.10 protein.
          Length = 130

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +1

Query: 217 DHLTLQFDCATASQ 258
           DH+TL FDCAT SQ
Sbjct: 26  DHVTLSFDCATTSQ 39


>Z81142-12|CAI58637.1|  192|Caenorhabditis elegans Hypothetical
           protein H02K04.2 protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 598 SKLSACSPCLPPLSNTTSGTSGPRSSLEXXPTSP 497
           S +SAC P +PP + TT+ T+   ++    P  P
Sbjct: 15  SHVSACIPMVPPETTTTTTTTTTTTTTTLPPVCP 48


>AL023813-3|CAI58661.1|  192|Caenorhabditis elegans Hypothetical
           protein H02K04.2 protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 598 SKLSACSPCLPPLSNTTSGTSGPRSSLEXXPTSP 497
           S +SAC P +PP + TT+ T+   ++    P  P
Sbjct: 15  SHVSACIPMVPPETTTTTTTTTTTTTTTLPPVCP 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,352,108
Number of Sequences: 27780
Number of extensions: 273948
Number of successful extensions: 586
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)