Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B15
         (926 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000196-6|ABC71844.1|  137|Caenorhabditis elegans Hypothetical ...   153   1e-37
AF000196-5|AAC24255.2|  140|Caenorhabditis elegans Hypothetical ...   153   1e-37
U51999-8|AAA96090.2|  465|Caenorhabditis elegans Glutamate recep...    31   0.88 
AF318611-1|AAK01099.1|  436|Caenorhabditis elegans ionotropic gl...    31   0.88 
U64833-9|AAS47683.1|  312|Caenorhabditis elegans Serpentine rece...    30   2.0  
Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical ...    29   3.6  

>AF000196-6|ABC71844.1|  137|Caenorhabditis elegans Hypothetical
           protein B0041.6b protein.
          Length = 137

 Score =  153 bits (372), Expect = 1e-37
 Identities = 70/129 (54%), Positives = 96/129 (74%)
 Frame = +3

Query: 51  VKLFSSAHRLHSPFLSDEENKKVYGKCNNPNGHGHNYVVLVTVKGPVDPQTGMVMNITDL 230
           V  FS+AHRLHS  LSD ENK+ +GKCNN NGHGHNYV  V ++G VDP +GMV ++  L
Sbjct: 9   VDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSGMVYDLAKL 68

Query: 231 KKYIKTAILEPLDHKNLDNDVPYFKTMASTTENVAIYVWDQLQRIMEKPQLLHEVKILET 410
           KK + + +L+ +DH+NLD DV +FKT  ST+ENVAIY++++L+ +M  P +L++V I ET
Sbjct: 69  KKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEET 127

Query: 411 EKNHVVYRG 437
            KN   Y+G
Sbjct: 128 PKNIFTYKG 136


>AF000196-5|AAC24255.2|  140|Caenorhabditis elegans Hypothetical
           protein B0041.6a protein.
          Length = 140

 Score =  153 bits (372), Expect = 1e-37
 Identities = 70/129 (54%), Positives = 96/129 (74%)
 Frame = +3

Query: 51  VKLFSSAHRLHSPFLSDEENKKVYGKCNNPNGHGHNYVVLVTVKGPVDPQTGMVMNITDL 230
           V  FS+AHRLHS  LSD ENK+ +GKCNN NGHGHNYV  V ++G VDP +GMV ++  L
Sbjct: 12  VDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSGMVYDLAKL 71

Query: 231 KKYIKTAILEPLDHKNLDNDVPYFKTMASTTENVAIYVWDQLQRIMEKPQLLHEVKILET 410
           KK + + +L+ +DH+NLD DV +FKT  ST+ENVAIY++++L+ +M  P +L++V I ET
Sbjct: 72  KKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEET 130

Query: 411 EKNHVVYRG 437
            KN   Y+G
Sbjct: 131 PKNIFTYKG 139


>U51999-8|AAA96090.2|  465|Caenorhabditis elegans Glutamate receptor
           family (ampa)protein 7 protein.
          Length = 465

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 655 ITYIMFLKYFKLLKWLNWLCTLCDDLIITDXIFIYDR 765
           + Y +F K+ K+L+W  WLC +   L  +  ++I+DR
Sbjct: 124 VEYSLF-KFMKVLEWPVWLCIVAAYLFTSILLWIFDR 159


>AF318611-1|AAK01099.1|  436|Caenorhabditis elegans ionotropic
           glutamate receptor GLR-7 protein.
          Length = 436

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 655 ITYIMFLKYFKLLKWLNWLCTLCDDLIITDXIFIYDR 765
           + Y +F K+ K+L+W  WLC +   L  +  ++I+DR
Sbjct: 108 VEYSLF-KFMKVLEWPVWLCIVAAYLFTSILLWIFDR 143


>U64833-9|AAS47683.1|  312|Caenorhabditis elegans Serpentine
           receptor, class x protein115 protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 299 VWNIII*ILMVEWFQDGCFYVFLEVSYIHHHTSLRIYRTLYCYKNNIIMTVTIRIVAFTI 120
           +W I I ++ +    DGC Y+F   S     T     RTL  Y  N+++ +   I++F+I
Sbjct: 128 LWCIAI-LMSLPAMIDGCSYIFFVDSVSWSPTDTVCSRTLSEYVTNLVLVMA--IISFSI 184

Query: 119 N 117
           N
Sbjct: 185 N 185


>Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 13  PXHYRESLRFDTP*NCSVPLIGCTARF*VT-KRTKKFMVNATILMVTVIIML 165
           P  Y  +L F +   C++ ++G  ARF  T +R ++F +  T ++   ++ L
Sbjct: 272 PLFYMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSL 323


>Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 13  PXHYRESLRFDTP*NCSVPLIGCTARF*VT-KRTKKFMVNATILMVTVIIML 165
           P  Y  +L F +   C++ ++G  ARF  T +R ++F +  T ++   ++ L
Sbjct: 267 PLFYMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSL 318


>AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 13  PXHYRESLRFDTP*NCSVPLIGCTARF*VT-KRTKKFMVNATILMVTVIIML 165
           P  Y  +L F +   C++ ++G  ARF  T +R ++F +  T ++   ++ L
Sbjct: 272 PLFYMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSL 323


>AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 13  PXHYRESLRFDTP*NCSVPLIGCTARF*VT-KRTKKFMVNATILMVTVIIML 165
           P  Y  +L F +   C++ ++G  ARF  T +R ++F +  T ++   ++ L
Sbjct: 267 PLFYMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSL 318


>AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 13  PXHYRESLRFDTP*NCSVPLIGCTARF*VT-KRTKKFMVNATILMVTVIIML 165
           P  Y  +L F +   C++ ++G  ARF  T +R ++F +  T ++   ++ L
Sbjct: 272 PLFYMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSL 323


>AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 13  PXHYRESLRFDTP*NCSVPLIGCTARF*VT-KRTKKFMVNATILMVTVIIML 165
           P  Y  +L F +   C++ ++G  ARF  T +R ++F +  T ++   ++ L
Sbjct: 267 PLFYMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSL 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,565,007
Number of Sequences: 27780
Number of extensions: 363795
Number of successful extensions: 840
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)