Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B14
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 291 6e-79
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 288 4e-78
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 288 4e-78
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 2e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 178 5e-45
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 178 5e-45
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 161 5e-40
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 4e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 79 5e-15
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 79 5e-15
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 79 5e-15
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 75 5e-14
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 75 5e-14
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 3e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 6e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 8e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 5e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.005
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.12
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.12
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.4
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.5
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.3
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 3.3
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 3.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 3.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 3.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 3.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF047656-12|AAC05111.1| 168|Caenorhabditis elegans Hypothetical... 29 5.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 291 bits (713), Expect = 6e-79
Identities = 153/212 (72%), Positives = 161/212 (75%)
Frame = +1
Query: 172 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 351
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 352 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 531
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 532 GEFEAGISKNGQTREHALARFHPRXSNSSS*E*TKWIPLNHHTVSPDLRKSRRKYPHTSR 711
GEFEAGISKNGQTREHAL + + + + L T SPD +SR
Sbjct: 121 GEFEAGISKNGQTREHALL--------AQTLGVKQLVSLRSPTRSPD----------SSR 162
Query: 712 RLATTQLLSLSCPFLDGTETTCWSLQPKCLGS 807
R T Q L D TETTC C GS
Sbjct: 163 RSDTIQRLFHLSQSPDSTETTCLRSPRTCHGS 194
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 288 bits (706), Expect = 4e-78
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = +1
Query: 172 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 351
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 352 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 531
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 532 GEFEAGISKNGQTREHAL 585
GEFEAGISKNGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
Score = 112 bits (270), Expect = 3e-25
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 606 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 785
VKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEV 204
Query: 786 STKMPWFXDGRWSVRK 833
S+ MPWF W+V +
Sbjct: 205 SSNMPWFKG--WAVER 218
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 288 bits (706), Expect = 4e-78
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = +1
Query: 172 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 351
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 352 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 531
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 532 GEFEAGISKNGQTREHAL 585
GEFEAGISKNGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
Score = 112 bits (270), Expect = 3e-25
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 606 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 785
VKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEV 204
Query: 786 STKMPWFXDGRWSVRK 833
S+ MPWF W+V +
Sbjct: 205 SSNMPWFKG--WAVER 218
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect = 2e-65
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +1
Query: 172 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 351
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 352 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 522
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 106 bits (255), Expect = 2e-23
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +3
Query: 615 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 794
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 795 MPWFXDGRWSVRK 833
MPWF W+V +
Sbjct: 174 MPWFKG--WAVER 184
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 178 bits (433), Expect = 5e-45
Identities = 80/135 (59%), Positives = 101/135 (74%)
Frame = +1
Query: 181 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 360
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 361 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 540
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 541 EAGISKNGQTREHAL 585
E G GQT+EHAL
Sbjct: 287 ETGFENGGQTKEHAL 301
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/71 (38%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 606 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 782
V QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 308 VTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 363
Query: 783 PSTKMPWFXDG 815
++ W+ DG
Sbjct: 364 -RMELDWY-DG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 178 bits (433), Expect = 5e-45
Identities = 80/135 (59%), Positives = 101/135 (74%)
Frame = +1
Query: 181 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 360
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 361 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 540
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 541 EAGISKNGQTREHAL 585
E G GQT+EHAL
Sbjct: 305 ETGFENGGQTKEHAL 319
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/71 (38%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 606 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 782
V QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 326 VTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 381
Query: 783 PSTKMPWFXDG 815
++ W+ DG
Sbjct: 382 -RMELDWY-DG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 161 bits (392), Expect = 5e-40
Identities = 70/137 (51%), Positives = 99/137 (72%)
Frame = +1
Query: 175 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 354
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 355 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 534
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 535 EFEAGISKNGQTREHAL 585
EFE G + GQTREH++
Sbjct: 224 EFETGFDRGGQTREHSM 240
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 606 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHG 767
VK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 247 VKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 4e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 172 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 351
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 352 DKLKAER 372
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 78.6 bits (185), Expect = 5e-15
Identities = 50/136 (36%), Positives = 69/136 (50%)
Frame = +1
Query: 178 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 357
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 358 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 537
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 538 FEAGISKNGQTREHAL 585
QTREH L
Sbjct: 150 MP-------QTREHLL 158
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 78.6 bits (185), Expect = 5e-15
Identities = 50/136 (36%), Positives = 69/136 (50%)
Frame = +1
Query: 178 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 357
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 358 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 537
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 538 FEAGISKNGQTREHAL 585
QTREH L
Sbjct: 151 MP-------QTREHLL 159
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 78.6 bits (185), Expect = 5e-15
Identities = 50/136 (36%), Positives = 69/136 (50%)
Frame = +1
Query: 178 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 357
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 358 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 537
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 538 FEAGISKNGQTREHAL 585
QTREH L
Sbjct: 151 MP-------QTREHLL 159
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 75.4 bits (177), Expect = 5e-14
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +1
Query: 184 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 357
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 358 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 537
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 538 FEAGISKNGQTREHAL 585
E QT+EH +
Sbjct: 146 ME-------QTKEHLI 154
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 75.4 bits (177), Expect = 5e-14
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +1
Query: 184 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 357
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 358 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 537
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 538 FEAGISKNGQTREHAL 585
E QT+EH +
Sbjct: 146 ME-------QTKEHLI 154
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.4 bits (130), Expect = 3e-08
Identities = 43/134 (32%), Positives = 61/134 (45%)
Frame = +1
Query: 196 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 375
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 376 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 555
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 556 KNGQTREHALARFH 597
T LAR++
Sbjct: 151 SQTFTVNRQLARYN 164
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.4 bits (130), Expect = 3e-08
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +1
Query: 196 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 375
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 376 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 534
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +1
Query: 196 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 375
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 376 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 534
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.2 bits (102), Expect = 6e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 172 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 324
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 325 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 492
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 493 QADCAVLIVAAGTG 534
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.8 bits (101), Expect = 8e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 172 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 324
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 325 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 492
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 493 QADCAVLIVAAGTG 534
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect(2) = 5e-04
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 319 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 495
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 496 ADCAVLIVAAGTG 534
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 5e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 199 IVVIGHVDSGKST 237
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 178 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 354
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 355 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 519
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 178 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 354
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 355 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 519
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 196 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 375
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 376 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 534
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 196 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 375
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 376 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 534
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 30.7 bits (66), Expect = 1.4
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Frame = +1
Query: 193 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 372
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 373 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 549
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 550 ISKNGQTREHAL 585
I QT EH L
Sbjct: 109 IQP--QTAEHLL 118
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 522
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 436 IIDAPGHRDFIKNMITGTSQADCAVLIV 519
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.5 bits (63), Expect = 3.3
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Frame = +1
Query: 193 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 366
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 367 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 528
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAAD 285
Query: 529 TG 534
G
Sbjct: 286 RG 287
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 274 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 375
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 274 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 375
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 697 PHTSRRLATTQLLSLSCPFLD 759
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 697 PHTSRRLATTQLLSLSCPFLD 759
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 697 PHTSRRLATTQLLSLSCPFLD 759
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 697 PHTSRRLATTQLLSLSCPFLD 759
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 193 INIVVIGHVDSGKSTTT 243
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF047656-12|AAC05111.1| 168|Caenorhabditis elegans Hypothetical
protein F17E9.2 protein.
Length = 168
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 691 SFLISSNLGSLYGGSVESILFTPTMSCLTXEGESEP 584
SFL + L G V FT T+SC++ G S P
Sbjct: 7 SFLFIHSCTPLLGDDVTKFHFTGTLSCISNSGSSIP 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,531,292
Number of Sequences: 27780
Number of extensions: 447398
Number of successful extensions: 1324
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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