Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B12
         (909 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.35 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   1.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   7.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   7.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +3

Query: 72  LSYCYLYTY*KISFVICMQWVFSHIYNFKLLVCLHTINFTIWTLKVFLLRLIC 230
           L YC    +  + F++C  + +   Y F +L+C++   +      V LL L+C
Sbjct: 84  LFYCPFIIF-TVHFLLCTYYFY---YAFIILLCVYYFYYAFIIFTVHLLFLLC 132


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 646 NQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKRDT 780
           + ++ E E K E  +D+++    IED+ +DE         KK+ T
Sbjct: 224 SDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKT 268



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 676 VESPKDEEEAVEYIEDISDDEKLSVIVNTIKKRDTPESVTVIN 804
           +E P+DEEE  +  ED +  E L  ++ +I      E V V N
Sbjct: 538 LELPEDEEEKKKREEDKAKFEGLCKVMKSILDNKV-EKVVVSN 579


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 377 LSLDKDENLLSNAYTAVTAIKPHYELPSXSVR 472
           LSLD+ + +L      V   KPHYEL    VR
Sbjct: 333 LSLDEKKYILQEV---VRVKKPHYELNMVEVR 361


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
 Frame = -1

Query: 273 ILLYWIFGFMI-STVC 229
           I  YW FGF+I  TVC
Sbjct: 320 IYFYWSFGFLIVRTVC 335


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
 Frame = -1

Query: 273 ILLYWIFGFMI-STVC 229
           I  YW FGF+I  TVC
Sbjct: 320 IYFYWSFGFLIVRTVC 335


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 368 MYPLSLDKDENLLSNAYTAVTAIKPHYELPSXSVRCMPNIN 490
           M    L  D   ++ +  A++ + P Y + S S   MP++N
Sbjct: 1   MLTQKLYSDSTTMATSSNAMSPMTPTYSMNSMSCVSMPSMN 41


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +1

Query: 610 NENSQIDISPKSNQEKIELEIKVESPKDEEEAVE 711
           NE++ +  SP+  ++   + +KVE+ ++   + E
Sbjct: 168 NEDTSLHPSPRITKKANSVSVKVENRRNSPNSCE 201


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +1

Query: 610 NENSQIDISPKSNQEKIELEIKVESPKDEEEAVE 711
           NE++ +  SP+  ++   + +KVE+ ++   + E
Sbjct: 116 NEDTSLHPSPRITKKANSVSVKVENRRNSPNSCE 149


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +1

Query: 610 NENSQIDISPKSNQEKIELEIKVESPKDEEEAVE 711
           NE++ +  SP+  ++   + +KVE+ ++   + E
Sbjct: 299 NEDTSLHPSPRITKKANSVSVKVENRRNSPNSCE 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,842
Number of Sequences: 336
Number of extensions: 3981
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)