Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B12
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0078 - 1012031-1012084,1012998-1013105,1013610-1013661,101... 33 0.41
09_04_0281 - 16360082-16361059,16361608-16361688,16363287-163636... 30 2.2
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 30 2.9
05_01_0143 - 944169-947273 29 3.9
11_06_0436 + 23531000-23531524 29 5.1
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313... 29 6.7
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 29 6.7
11_06_0616 + 25546175-25546359,25546778-25546837,25546939-255469... 28 8.9
05_05_0069 + 22134742-22134930,22137132-22137199,22137401-221375... 28 8.9
>10_01_0078 -
1012031-1012084,1012998-1013105,1013610-1013661,
1013926-1016603
Length = 963
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 194 MDVKSVSPETYLQTVDIMKPNIQYNKIDIPIHLFDYLNSDNCNLDKI 334
MD + P T+ +M I+ I+ I LF+ LNSD C DKI
Sbjct: 748 MDQTGILPNHVTYTI-LMNNQIRLGDINHAIQLFNSLNSDGCVFDKI 793
>09_04_0281 -
16360082-16361059,16361608-16361688,16363287-16363650,
16363675-16364348
Length = 698
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDD 735
D++ +G E SQ+ S N + E + + S +EEE E++ +I DD
Sbjct: 9 DRRWPESQGNEEKSQVPSSLDPNNTEDEHQEENNSEDEEEEQEEFLYEIDDD 60
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIE 720
+K E+LY GKN + + D+ + ++ + E +S D++E EY E
Sbjct: 127 EKIERLYMGKNSSDEEDLDDAPDDDQYDTE---DSFIDDDELDEYFE 170
>05_01_0143 - 944169-947273
Length = 1034
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 616 NSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTI 765
++ +D+ NQEKIEL+ V+ K+ + + + +K+ +VN +
Sbjct: 276 SNTVDVMYSINQEKIELQATVDKIKEYFQKDSEVSVVEMADKIDALVNKV 325
>11_06_0436 + 23531000-23531524
Length = 174
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 640 KSNQEKIELEIKVESPKDEEEAVEYIEDISDDE 738
+S QE +++ E DEEE + EDI++D+
Sbjct: 130 ESGQEDFDVDSDTEDDDDEEEEISDEEDINEDD 162
>08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,
3133324-3133383,3133466-3133560,3133660-3133816,
3133896-3134021,3134398-3134478,3134557-3134647,
3134735-3134868,3135068-3135136,3135219-3135308,
3135405-3135508,3135594-3135762,3136066-3136134
Length = 916
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 592 KLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKK 771
K+ KGKN + D PK N E K+ + + E +E + I +D K +V + T K
Sbjct: 815 KVRKGKNLGNDKDGKPKRNLAPEAFEKKISQIETKIEKMEMDKKIKEDLK-TVALGTSKI 873
Query: 772 RDTPESVTV 798
+TV
Sbjct: 874 NYLDPRITV 882
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDE-EEAVEYIEDIS 729
+KKEK ++ +NE NQE+ ++E +E + +E +E+ IS
Sbjct: 1514 NKKEKAFRRRNEKVFTTAIQNMNQERKQVEESIEKHRQAVKEVIEHYTGIS 1564
>11_06_0616 +
25546175-25546359,25546778-25546837,25546939-25546957,
25547948-25547998,25548097-25548230,25548558-25548948,
25549840-25549890
Length = 296
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +2
Query: 335 CLSCLSINSQLMYPLSLDK----DENLLSNAYTAVTAIK--PHYELP 457
CL+ L + +Q YP + D + L NA A A+ HY+LP
Sbjct: 199 CLTSLQLGAQFPYPSAFDNAGLLSDRLFDNAAAAAAAMDFGGHYDLP 245
>05_05_0069 +
22134742-22134930,22137132-22137199,22137401-22137514,
22137629-22137791,22137868-22138014,22138516-22138560,
22138868-22138933
Length = 263
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Frame = +1
Query: 577 HDKKEKLYKGKNE---NSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISD----D 735
H+ +EKL+ + E N I ++ I+L + + PKD V +EDI + D
Sbjct: 144 HEIQEKLHFSEKEYFKNHSAAIKSYMSEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGD 203
Query: 736 EKLSVIVNT---IKKRDTPESVT 795
+S+ N+ +++ DT + ++
Sbjct: 204 HSISLTKNSLHFLRRTDTEQFIS 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,248,327
Number of Sequences: 37544
Number of extensions: 322206
Number of successful extensions: 815
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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