Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B12
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 35 0.070
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 35 0.092
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 34 0.12
U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical pr... 31 0.86
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 31 0.86
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 31 0.86
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 31 1.5
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 31 1.5
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 1.5
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 30 2.0
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 30 2.0
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 30 2.0
AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ... 30 2.0
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 30 2.6
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 30 2.6
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 29 4.6
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 29 4.6
AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown prote... 29 4.6
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 4.6
AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical ... 29 4.6
AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical ... 29 4.6
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 4.6
AC006663-5|AAY43999.1| 490|Caenorhabditis elegans Hypothetical ... 29 4.6
U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical pr... 29 6.1
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 6.1
U53154-3|AAC25852.1| 346|Caenorhabditis elegans Hypothetical pr... 29 6.1
U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related ... 29 6.1
U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related ... 29 6.1
AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protei... 29 6.1
AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protei... 29 6.1
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 6.1
Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 28 8.0
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 28 8.0
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
DKKE+ K K E + ++ K EK + E K E K EEE E +E ++EK
Sbjct: 287 DKKEEEPK-KEEEKKEEVEKKEEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEK 339
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
+KKE++ K K E+ + D PK +EK E E K E K EEE + E ++EK
Sbjct: 298 EKKEEVEK-KEEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEK 350
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 631 ISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
I+ K EK E + K E PK EEE E +E +DEK
Sbjct: 275 INHKEVAEKNEEDKKEEEPKKEEEKKEEVEKKEEDEK 311
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
+KKE+ K K+E + + K ++K E+E K E K +EE + E ++EK
Sbjct: 304 EKKEEDEK-KDEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEK 356
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 607 KNENSQIDISPKSNQE-KIELEIKVESPKDEEEAVEYIEDISDDEKLSV 750
KNE + + PK +E K E+E K E K +EE + E +++K V
Sbjct: 283 KNEEDKKEEEPKKEEEKKEEVEKKEEDEKKDEEPKKEEEKKEEEQKEEV 331
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEE-EAVE--YIEDISDDEK 741
++KE++ K K E + D PK +EK E E K E +E+ E VE +E D+E+
Sbjct: 326 EQKEEVEK-KEEEEKKDEEPKKEEEKKEEEEKKEDEVEEKSEKVEEKELEPKKDEEE 381
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 35.1 bits (77), Expect = 0.070
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVN 759
DKKE+ + K E ++ + + N+EK + K E KDE+E E ED + EK
Sbjct: 115 DKKEESKEDKKEKTKTEDNEGKNEEK--KKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEE 172
Query: 760 TIK---KRDTPESVTVINE 807
+K K+D V I +
Sbjct: 173 KVKEDPKKDDKSGVDTIKK 191
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 580 DKKEKL----YKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKL- 744
DKKEK +GKNE + + + EK E + K E K++E+ E + +D K
Sbjct: 123 DKKEKTKTEDNEGKNEEKKKEKKEEKKDEK-EKKEKTEDDKEKEKEKTKEEKVKEDPKKD 181
Query: 745 -SVIVNTIKKRDT--PESVTVI 801
V+TIKK + P S ++
Sbjct: 182 DKSGVDTIKKEGSTAPASTALV 203
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 34.7 bits (76), Expect = 0.092
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDIS--PKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIV 756
K+EK+ K EN + + PK +EK E E K E K+EE+ E++ ++EK
Sbjct: 70 KEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKK----EEVKEEEKKDDSK 125
Query: 757 NTIKKRD 777
KK+D
Sbjct: 126 RDEKKKD 132
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 34.3 bits (75), Expect = 0.12
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 589 EKLYKGKNENSQI-DISPKSNQEKIELE-IKVESPKDEEEAVEYIEDISDDEKLSVIVNT 762
++ Y KN QI DI K+ + K E IK+ KDEEE E DI DD+ LS+
Sbjct: 2868 KRKYSEKNVEIQISDIIIKNEERKRGEEMIKI---KDEEEWSEDDSDIDDDDGLSIEDCG 2924
Query: 763 IKKRDTPESVTVI 801
R T ES T +
Sbjct: 2925 QSSRSTSESKTAV 2937
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 34.3 bits (75), Expect = 0.12
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 589 EKLYKGKNENSQI-DISPKSNQEKIELE-IKVESPKDEEEAVEYIEDISDDEKLSVIVNT 762
++ Y KN QI DI K+ + K E IK+ KDEEE E DI DD+ LS+
Sbjct: 2868 KRKYSEKNVEIQISDIIIKNEERKRGEEMIKI---KDEEEWSEDDSDIDDDDGLSIEDCG 2924
Query: 763 IKKRDTPESVTVI 801
R T ES T +
Sbjct: 2925 QSSRSTSESKTAV 2937
>U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical
protein C33G8.10 protein.
Length = 347
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 485 CLACSAHFXRVTHNVA**Q*QQCKHLIINSHPC 387
C AC+A F R H+ CKH + SHPC
Sbjct: 20 CRACAAFFRRYVHSRKLDISCTCKHRLATSHPC 52
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 607 KNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
K+ + + + ++E++E E E DEEE V+ ED SDDE+
Sbjct: 1419 KDAEEESEEEEEEDEEEVEDEEVDEDASDEEEEVDGEEDESDDEE 1463
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDI-SPKSNQEKIELEIKVESPKDEEEA 705
K++K K K E SQ S K++ EK E+E K E P E+EA
Sbjct: 111 KEQKSEKKKKEGSQRSARSKKASSEKPEVEKKPEEPPVEDEA 152
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 616 NSQIDISPKSNQE---KIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKRDTPE 786
NS + ISP+ ++ K+E K E KDE+ E D+ +E S + +K+ P
Sbjct: 977 NSSLSISPQEIEKASSKVETLNKTEEVKDEKSENEVTPDLKSEEPKS-LETKVKEEPKPA 1035
Query: 787 SVTVINE 807
T + E
Sbjct: 1036 VQTPVKE 1042
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSN---QEKIELEIKVESPKDEEEAVEYIEDISDDEKL 744
DKK K + + PK QE+ E E VE +DEEE+ E +ED+ +DEK+
Sbjct: 136 DKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEEEESVEG-EDEEESQE-VEDLKEDEKM 191
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 637 PKSNQEKIELEIKVESPKDEE--EAVEYIEDISDDEKLSVIVNTIKKR 774
PK+ + K+E +K E+PK EE E V+ +ED + L V +KKR
Sbjct: 403 PKNEEPKMEEPVKEEAPKVEEKKEEVKMVEDPKVESPLE--VKKMKKR 448
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
KKE KG + ++++ SPK EK + K E E E E +++ DEK
Sbjct: 100 KKENKDKGNDSSAEVTKSPKGVVEKRNKKAKEEETATEAEGDE--KEVKKDEK 150
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIE--LEIKVESPKDEEEAVEYIEDISDDEKL 744
++K+KL K + ++ + K ++ K + E E KDEE+ + ++D +DEK+
Sbjct: 105 EEKDKLSVKKTQETKSERKDKKDERKEDDKKEENKEKSKDEEKKKDEVKDKKEDEKM 161
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVI-VN 759
+K+K K K + + S +S + E E K SPK +++ ++ +S DE+ V
Sbjct: 241 EKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVE 300
Query: 760 TIKKRDTPESVTVINES 810
+ ++ +VT+I++S
Sbjct: 301 VLPQKKKRGAVTLISDS 317
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVI-VN 759
+K+K K K + + S +S + E E K SPK +++ ++ +S DE+ V
Sbjct: 241 EKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVE 300
Query: 760 TIKKRDTPESVTVINES 810
+ ++ +VT+I++S
Sbjct: 301 VLPQKKKRGAVTLISDS 317
>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
protein Y37B11A.2 protein.
Length = 1133
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +1
Query: 628 DISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLS 747
D PK+ + ++ + + P + +EA++ E++ DDE+L+
Sbjct: 202 DNDPKNQEAEMTMFADSQKPVERDEAMDVDEEVEDDEELN 241
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 601 KGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIE-DISDDEKLSVIVNTIKKRD 777
K +E+ +S K ++++ + K ES KDEE+ E + +SD+ K S + + K++
Sbjct: 187 KDIDESLNAALSDKKEKKEVASDKKKESKKDEEDINESMNAALSDERKKSASLASSDKKE 246
Query: 778 TPESVTVINESXL 816
+ + +E+ L
Sbjct: 247 SSKKDESSDEANL 259
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVE-SPKDEEEAV---EYIEDISDDEKLS 747
D++E+L++ E ++D + E++ E E ++EEE V E IE+ +DE+ S
Sbjct: 1052 DEEEELFE---EEEEVDEEYEGEVEEVHRESSEELDDEEEEEEVMPEEEIEEDQEDEQES 1108
Query: 748 VIVNTIKKRDTP 783
V+ + + +D P
Sbjct: 1109 VLDESEEDKDEP 1120
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 485 CLACSAHFXRVTHNVA**Q*QQCKHLIINSHPC 387
C AC+A F R H+ C +I+SHPC
Sbjct: 31 CRACAAFFRRYVHSTKQEISCTCDQRLISSHPC 63
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKV-ESPKDEEEAVEYIEDISDDEKLS 747
K EK+ + E +I+ SPK +++ E ++ E PK E+A E ++I K S
Sbjct: 920 KSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKS 975
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKV-ESPKDEEEAVEYIEDISDDEKLS 747
K EK+ + E +I+ SPK +++ E ++ E PK E+A E ++I K S
Sbjct: 918 KSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKS 973
>AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown protein
protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 628 DISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKRDTPESVTVINE 807
DI + IE ++ V P DE A++Y ED++ + ++ ++N + D +SV N
Sbjct: 262 DIDDGGVGDDIEQQVVVGGPSDEM-AIQYDEDLAFQQHINSVLNRLS--DDEKSVMKFNM 318
Query: 808 SXLV 819
++
Sbjct: 319 QKII 322
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
KKE+ K K++ S+ S K ++K E + + E K+E++ + +D D++K
Sbjct: 66 KKEEEKKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKK 118
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
+KKE+ K E + K ++K E K E K+EE+ E E+ +DEK
Sbjct: 164 EKKEEKKDDKEEKKEEKKEEKKEEKKEE---KKEEKKEEEKKEEKKEEKKEDEK 214
>AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical
protein C05D2.6a protein.
Length = 516
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 628 DISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKRDTPESVTVINE 807
DI + IE ++ V P DE A++Y ED++ + ++ ++N + D +SV N
Sbjct: 418 DIDDGGVGDDIEQQVVVGGPSDEM-AIQYDEDLAFQQHINSVLNRLS--DDEKSVMKFNM 474
Query: 808 SXLV 819
++
Sbjct: 475 QKII 478
>AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical
protein C05D2.6b protein.
Length = 515
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 628 DISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKRDTPESVTVINE 807
DI + IE ++ V P DE A++Y ED++ + ++ ++N + D +SV N
Sbjct: 417 DIDDGGVGDDIEQQVVVGGPSDEM-AIQYDEDLAFQQHINSVLNRLS--DDEKSVMKFNM 473
Query: 808 SXLV 819
++
Sbjct: 474 QKII 477
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIE--LEIKVESPKDEEEAVEYIEDISDDEK 741
++K+K+ K + ++ + K +++K + E E KDEE+ + ++D +DEK
Sbjct: 99 EEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEEKKKDEVKDKKEDEK 154
>AC006663-5|AAY43999.1| 490|Caenorhabditis elegans Hypothetical
protein H24K24.2 protein.
Length = 490
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2
Query: 194 MDVKSVSPETYLQTVDIMKPNIQYNKIDIPIHLFDYLNSDNCNLDKICLSCLSINSQLMY 373
+ + + PETY +I++ N Y D + L NS+N N D+IC + +++ S++ Y
Sbjct: 353 LSLADLLPETY-SNAEIIRSNRLY--WDAIVKL---TNSENTNFDEICWTAMNMMSKVTY 406
>U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical
protein F47B3.5 protein.
Length = 199
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNT 762
K EK K KNE S+ + S + K + K E PK E+ ++ D K V +
Sbjct: 13 KSEKKEKSKNEGSKKEESKDKEKSKKSEDKKSEDPKKEDAKKPDVKG-KDTFKKPVDESA 71
Query: 763 IKKRDTPESVTVI 801
+ + P T++
Sbjct: 72 VAPKKDPNYQTLV 84
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNT 762
K EK K KNE S+ + S + K + K E PK E+ ++ D K V +
Sbjct: 95 KSEKKEKSKNEGSKKEESKDKEKSKKSEDKKSEDPKKEDAKKPDVKG-KDTFKKPVDESA 153
Query: 763 IKKRDTPESVTVI 801
+ + P T++
Sbjct: 154 VAPKKDPNYQTLV 166
>U53154-3|AAC25852.1| 346|Caenorhabditis elegans Hypothetical
protein C33G8.8 protein.
Length = 346
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 485 CLACSAHFXRVTHNVA**Q*QQCKHLIINSHPC 387
C AC+A F R H+ C H + +SHPC
Sbjct: 20 CRACAAFFRRYVHSQKLVIECTCLHRLPSSHPC 52
>U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related
protein 2, isoform b protein.
Length = 482
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/40 (35%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +1
Query: 619 SQIDI--SPKSNQEKIELEIKVESPKDEEEAVEYIEDISD 732
SQ+D+ S KS E++++E+K+E DE++ E+ E++ +
Sbjct: 304 SQLDMTNSIKSRVERVDVEVKLEPCNDEDD--EFSEEVDE 341
>U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related
protein 2, isoform a protein.
Length = 548
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/40 (35%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +1
Query: 619 SQIDI--SPKSNQEKIELEIKVESPKDEEEAVEYIEDISD 732
SQ+D+ S KS E++++E+K+E DE++ E+ E++ +
Sbjct: 370 SQLDMTNSIKSRVERVDVEVKLEPCNDEDD--EFSEEVDE 407
>AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protein
protein.
Length = 482
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/40 (35%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +1
Query: 619 SQIDI--SPKSNQEKIELEIKVESPKDEEEAVEYIEDISD 732
SQ+D+ S KS E++++E+K+E DE++ E+ E++ +
Sbjct: 304 SQLDMTNSIKSRVERVDVEVKLEPCNDEDD--EFSEEVDE 341
>AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protein
protein.
Length = 548
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/40 (35%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +1
Query: 619 SQIDI--SPKSNQEKIELEIKVESPKDEEEAVEYIEDISD 732
SQ+D+ S KS E++++E+K+E DE++ E+ E++ +
Sbjct: 370 SQLDMTNSIKSRVERVDVEVKLEPCNDEDD--EFSEEVDE 407
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNT 762
K+E NE +++ SPK N + + +SP+ VE E ++E+ V +
Sbjct: 563 KEESEESSDNEVEEVEDSPKKNDKTLR-----KSPRKPAAKVESEESFGNEEEEEVEESP 617
Query: 763 IKKRDTP 783
KK TP
Sbjct: 618 KKKGKTP 624
>Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical
protein K08E3.2 protein.
Length = 276
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 577 HDKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDE--EEAVEYIEDISDDEKLSV 750
H+KK K + K N + D + N+++ + E K E DE E E E+ DD+K
Sbjct: 105 HEKK-KTAEEKENNEKKDENKNKNKDERKDEKKDEKKDDEKDERNDEKKEEKKDDQKDDK 163
Query: 751 IVNTIKKRDTPESV 792
++ D PE +
Sbjct: 164 KAKSMISVDAPELI 177
>Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical
protein F10D11.4 protein.
Length = 168
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 577 HDKKEKLYK---GKNENSQIDISPKSNQEKIELEIKVESPKDEEE 702
H KK+ L K K E S+ K EK+E E+K E D E
Sbjct: 70 HKKKKSLIKVLSKKKERSKKKEKDKKPDEKVEKEVKKEDKPDNNE 114
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 652 EKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKR 774
E+I + V++ K E VEY+EDI +L V ++R
Sbjct: 239 EQIAMMKPVKTTKSETGMVEYLEDIIGTNRLEPFVKLFQRR 279
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPK---SNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVI 753
KK KG ++ + K S+ E+ E E+K +SPK ++ + D+E+ V
Sbjct: 177 KKSNKKKGSKKSPKKSAKSKDDDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVA 236
Query: 754 VNTIKK---RDTPE 786
KK +TPE
Sbjct: 237 TKKSKKSKRAETPE 250
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 607 KNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEK 741
K E + + PK +EK E K E D++E + +D D++K
Sbjct: 59 KKEEPKKEEEPKKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKK 103
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 649 QEKIELEIKVESPKDEEEAVEYIEDISDDE 738
Q + E K +EEEAVEY ED S+DE
Sbjct: 666 QRRQEKLAKKNRRAEEEEAVEYDEDGSEDE 695
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,546,175
Number of Sequences: 27780
Number of extensions: 348293
Number of successful extensions: 1433
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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