Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B12
(909 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g12875.1 68415.m01402 hypothetical protein 35 0.065
At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative non-co... 32 0.46
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 32 0.46
At3g14670.1 68416.m01856 hypothetical protein 32 0.60
At1g75190.1 68414.m08735 expressed protein 31 1.4
At1g58025.1 68414.m06576 DNA-binding bromodomain-containing prot... 31 1.4
At3g06670.1 68416.m00786 expressed protein 30 1.8
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 30 2.4
At1g77080.5 68414.m08973 MADS-box protein AGL27-II (AGL27) / MAD... 30 2.4
At1g77080.4 68414.m08976 MADS-box protein AGL27-II (AGL27) / MAD... 30 2.4
At1g77080.3 68414.m08974 MADS-box protein AGL27-II (AGL27) / MAD... 30 2.4
At1g77080.2 68414.m08975 MADS-box protein AGL27-II (AGL27) / MAD... 30 2.4
At5g47690.1 68418.m05887 expressed protein 29 4.3
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 29 4.3
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 29 4.3
At3g28770.1 68416.m03591 expressed protein 29 4.3
At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 29 4.3
At5g17910.1 68418.m02100 expressed protein 29 5.6
At4g21300.1 68417.m03077 pentatricopeptide (PPR) repeat-containi... 29 5.6
At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 28 7.4
At1g69070.1 68414.m07903 expressed protein 28 7.4
At3g46160.1 68416.m04995 protein kinase-related contains eukaryo... 28 9.8
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 28 9.8
At3g30845.1 68416.m03973 hypothetical protein 28 9.8
At1g59850.1 68414.m06741 expressed protein 28 9.8
At1g23280.1 68414.m02912 MAK16 protein-related contains similari... 28 9.8
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 35.1 bits (77), Expect = 0.065
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEE 702
++EK YK + E S+ D KS +E+ E E K E K+EE+
Sbjct: 196 EEEKSYKNEEEKSEKDEEEKSEEEESEEEEKEEEEKEEEK 235
>At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative
non-consensus acceptor splice site AT at exon 2; similar
to DEAD box helicase protein GB:NP_006764 from [Homo
sapiens], contains Pfam profile: PF00270 DEAD/DEAH box
helicase
Length = 568
Score = 32.3 bits (70), Expect = 0.46
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPK--DEEEAVEYIEDISDDEKLSVIV 756
KK + K + + ++ + Q+K E ++K K +EEE VE +ED D++ + ++
Sbjct: 23 KKNEQQKAEEKTHTVEENADETQKKSEKKVKKVRGKIEEEEEKVEAMEDGEDEKNIVIVG 82
Query: 757 NTIKKRDTPESVTVINESXL 816
I T +S+ + ++ +
Sbjct: 83 KGIMTNVTFDSLDLSEQTSI 102
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 610 NENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIV 756
N+ Q +S +SN EK +E+K + + E E +DISD +K I+
Sbjct: 473 NQKLQDSVSEQSNMEKFIMELKADLRRRERENTLLQKDISDLQKQVTIL 521
>At3g14670.1 68416.m01856 hypothetical protein
Length = 232
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVE 711
++ EK + ENS+ D +S +E+ E E K E K+EEE E
Sbjct: 69 EEGEKSDNNEEENSEKDEKEESEEEESEEEEKEEEEKEEEEKEE 112
>At1g75190.1 68414.m08735 expressed protein
Length = 131
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 637 PKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIK 768
P+ N E E + K E +++E+ EY ++ +DE+ V++N K
Sbjct: 34 PRKNLENPE-DFKKEESEEDEDYEEYEDEEEEDEEAEVVINREK 76
>At1g58025.1 68414.m06576 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487; contains
prenyl group binding site (CAAX box) Prosite:PS00294
Length = 769
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 613 ENSQIDISPKSNQEKIELEIKVESPKDE-EEAVEYIEDISDDEKLSVIVNTIKKRDTPES 789
E+ ID+ K QEK E+ ++++SP + + +E +++ ++E + V K + +
Sbjct: 394 EDMDIDVDKKPEQEKTEI-VELDSPVSKTQRVIENKQEVEEEENVEVESENKTKANVEDK 452
Query: 790 VTVINES 810
I+ S
Sbjct: 453 TQSIDRS 459
>At3g06670.1 68416.m00786 expressed protein
Length = 865
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 598 YKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKR 774
+K K E PKS + ++ +V+ E+E +Y + SD+E + NT K++
Sbjct: 622 FKVKYEQCLESAGPKSTSDAVDPRRRVDERALEKEEEDYFNEDSDEEDSASASNTQKEK 680
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEE 699
+KK K G N ++ + P++++E+IE ++ E P+ E+
Sbjct: 518 EKKAKKKTGGNTETETEEVPEASEEEIEAPVQEEKPQKEK 557
>At1g77080.5 68414.m08973 MADS-box protein AGL27-II (AGL27) / MADS
affecting flowering 1 (MAF1) contains similarity to MADS
box transcription factor GI:3688591 from [Triticum
aestivum]; contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); contains Pfam domain PF01486: K-box region
Length = 176
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 586 KEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKL 744
+ KL + +N +D S S +E++E + V + E +EYIE + + EKL
Sbjct: 101 QSKLEEPNVDNVSVD-SLISLEEQLETALSVSRARKAELMMEYIESLKEKEKL 152
>At1g77080.4 68414.m08976 MADS-box protein AGL27-II (AGL27) / MADS
affecting flowering 1 (MAF1) contains similarity to MADS
box transcription factor GI:3688591 from [Triticum
aestivum]; contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); contains Pfam domain PF01486: K-box region
Length = 196
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 586 KEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKL 744
+ KL + +N +D S S +E++E + V + E +EYIE + + EKL
Sbjct: 101 QSKLEEPNVDNVSVD-SLISLEEQLETALSVSRARKAELMMEYIESLKEKEKL 152
>At1g77080.3 68414.m08974 MADS-box protein AGL27-II (AGL27) / MADS
affecting flowering 1 (MAF1) contains similarity to MADS
box transcription factor GI:3688591 from [Triticum
aestivum]; contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); contains Pfam domain PF01486: K-box region
Length = 173
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 586 KEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKL 744
+ KL + +N +D S S +E++E + V + E +EYIE + + EKL
Sbjct: 101 QSKLEEPNVDNVSVD-SLISLEEQLETALSVSRARKAELMMEYIESLKEKEKL 152
>At1g77080.2 68414.m08975 MADS-box protein AGL27-II (AGL27) / MADS
affecting flowering 1 (MAF1) contains similarity to MADS
box transcription factor GI:3688591 from [Triticum
aestivum]; contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); contains Pfam domain PF01486: K-box region
Length = 192
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 586 KEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKL 744
+ KL + +N +D S S +E++E + V + E +EYIE + + EKL
Sbjct: 97 QSKLEEPNVDNVSVD-SLISLEEQLETALSVSRARKAELMMEYIESLKEKEKL 148
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNT 762
K+ + G + + PK + E E+ +ES D+ +++ ++ SD EK+ ++
Sbjct: 1241 KRRRSSSGHSPYKFSNSGPKVQLKASEDELHLESDMDKNVSLDSHDENSDQEKMLESISP 1300
Query: 763 IKKRDTPESVTVINES 810
K++ + S I ES
Sbjct: 1301 RKRKKSLSSKLKITES 1316
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 114 VICMQWVFSHIYNFKLLVCLHTINFTIWTL 203
++CM W +S IY+ +H IN T WT+
Sbjct: 348 ILCMSWKYSKIYH-----PIHVINSTNWTI 372
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 635 EISICEFSFFPLYNFSFLSCN*STFSKQSSLQYV 534
E ICE +P+Y+ SF SC +F S Y+
Sbjct: 400 EERICEACVYPIYHHSFYSCMSCSFILHESCAYL 433
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 607 KNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIKKRDTPE 786
K+ENS++ K N+EK E E ++++E E ++ K + KKR+ +
Sbjct: 983 KSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKD 1042
Query: 787 S 789
S
Sbjct: 1043 S 1043
>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 635 EISICEFSFFPLYNFSFLSCN*STFSKQSSLQYV 534
E ICE +P+Y+ SF SC +F S Y+
Sbjct: 360 EERICEACVYPIYHHSFYSCMSCSFILHESCAYL 393
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 577 HDKKE-KLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDEKLSV 750
HD E L G+ + Q D+ +K +L+ +S E E I DIS+DE + +
Sbjct: 620 HDVAEIVLGSGETHHEQSDMMEGETSDKGKLDEVSDSDSSLSEKEEKIRDISEDEAMLI 678
>At4g21300.1 68417.m03077 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 857
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 242 IMKPNIQYNKIDIPIHLFDYLNSDNCNLDKICLS 343
++K ++Y KID+P LFD + +C + + L+
Sbjct: 179 LIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212
>At1g80810.1 68414.m09481 expressed protein similar to
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]; similar
to bimD (GI:168025) [Emericella nidulans]
Length = 826
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKI-ELEIKVESPKDEEEAVEYIEDISDDEKLSV 750
++EK Y S+ + S + K E + + ++EEE ++++ED +++EK V
Sbjct: 742 EEEKQYPNSEGESEGEDSESEEEPKWRETDDMEDDEEEEEEEIDHMEDEAEEEKEEV 798
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +1
Query: 607 KNENSQIDISPKSNQEKI-----ELEIKVESPKDEEEAVEYIEDISDDEKLSVIVNTIK 768
K E + K+N +K+ ++ ++ PK+ EE + +ED S+++ + +IVN I+
Sbjct: 438 KGEGLSGTVKEKTNMKKMSSTQRDIPFMIDPPKNFEELLALVEDCSNEDVI-LIVNRIR 495
>At3g46160.1 68416.m04995 protein kinase-related contains eukaryotic
protein kinase domain, INTERPRO:IPR000719
Length = 393
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = +1
Query: 580 DKKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDE 738
D++E++Y+ + ++ I + E+ E ++ E+ +EEEA+E E+ +E
Sbjct: 338 DEEEEIYEEEEDDFYDGI--EDVDEEYEANLEAEAAVEEEEAIEIDEEYPKEE 388
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +2
Query: 227 LQTVDIMKPNIQYNKIDIPIHLFDYLNSDNCNLDKI-----CLSCLSINSQLMYPLSLDK 391
+QT + + ++ I+ FD++ ++NC KI C + S+++Y S D+
Sbjct: 50 IQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDR 109
Query: 392 DENLLSNAYTAVTAIKP 442
+ L + A P
Sbjct: 110 FKRELDGIQVELQATDP 126
>At3g30845.1 68416.m03973 hypothetical protein
Length = 105
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +1
Query: 679 ESPKDEEEA----VEYIEDISDDEKLSVIVNTIKKRDTPESVTVIN 804
ES D+EE V+ +ED+ DDE ++++ T K + T + T++N
Sbjct: 49 ESDGDDEEVTLSEVDELEDLEDDESETMMMTTKKMKKTMKE-TIMN 93
>At1g59850.1 68414.m06741 expressed protein
Length = 498
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 583 KKEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKD-EEEAV 708
K+ KGK+ N +S KSN +E + ++PKD E+EAV
Sbjct: 322 KRSNTLKGKDRNLNTPLSSKSND--VEPLDRGDTPKDVEQEAV 362
>At1g23280.1 68414.m02912 MAK16 protein-related contains similarity
to MAK16 protein SP:P10962 from [Saccharomyces
cerevisiae]
Length = 303
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 586 KEKLYKGKNENSQIDISPKSNQEKIELEIKVESPKDEEEAVEYIEDISDDE 738
K+ +Y + N + K +IE +VE ++EE +EY+E DDE
Sbjct: 170 KKGIYPTEIYNLSDSVFNKLLDREIETNDEVEKEEEEEGVIEYVE--GDDE 218
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,875,948
Number of Sequences: 28952
Number of extensions: 299616
Number of successful extensions: 1084
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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