Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B08
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   4.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   4.2  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 148 LISYILSINTNGIKRTDKQSVSRPLREILSLC 243
           ++ + L +  +G+ RTD      P+R I+  C
Sbjct: 38  ILLFTLGVTISGVYRTDFYKKLSPMRLIVQTC 69


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 345 LHSIFALSVLLHECDTDYHKTPNLINKL 262
           L S+  L  L+H+ +T+     N INK+
Sbjct: 499 LDSVEKLETLVHQLNTEVLHLSNAINKM 526


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 73   HVQSRRDIHSSINAVKISFASQIKVLISYILSINTNGI 186
            H Q+ +D+  +  AVK    S   +L S+   +  NGI
Sbjct: 1193 HCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGI 1230


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 373 HAGYG-CFQWLLLLSCGAVYA 432
           H  YG C+ W+L+L C    A
Sbjct: 170 HEFYGFCYLWVLILICNIALA 190


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = -1

Query: 770 SVPQRQKVTEXXGR*GPVAPMIPNPEKNLQARNPEKDC 657
           S    Q+ T       P AP + NP+  +      K+C
Sbjct: 441 STSTTQRTTTVSTTEAPPAPAVSNPQNEVDGSVAPKEC 478


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 18  HYREFLKILRVSGAARPHARSVETRH 95
           H+ +   + +V GAA  H  SV +RH
Sbjct: 135 HHHQTSLLGKVEGAATHHLGSVYSRH 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,643
Number of Sequences: 336
Number of extensions: 3767
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)