Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B08
(878 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13050.1 68416.m01626 transporter-related low similarity to a... 56 4e-08
At5g14570.2 68418.m01709 transporter, putative similar to trans-... 36 0.036
At5g14570.1 68418.m01708 transporter, putative similar to trans-... 36 0.036
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 35 0.082
At1g79820.2 68414.m09323 hexose transporter, putative similar to... 34 0.11
At1g79820.1 68414.m09322 hexose transporter, putative similar to... 34 0.11
At1g12940.1 68414.m01503 high-affinity nitrate transporter, puta... 34 0.14
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 32 0.58
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 32 0.58
At3g03090.1 68416.m00305 sugar transporter family protein simila... 31 1.0
At5g17010.1 68418.m01992 sugar transporter family protein simila... 30 1.8
At3g43790.3 68416.m04680 transporter-related low similarity to S... 29 3.1
At3g43790.2 68416.m04679 transporter-related low similarity to S... 29 3.1
At3g43790.1 68416.m04678 transporter-related low similarity to S... 29 3.1
At2g07727.1 68415.m00977 cytochrome b (MTCYB) (COB) (CYTB) conta... 29 3.1
At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR... 29 3.1
At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR... 29 3.1
At5g66420.1 68418.m08377 expressed protein 29 5.4
At5g16150.3 68418.m01888 hexose transporter, putative strong sim... 28 7.2
At5g16150.2 68418.m01887 hexose transporter, putative strong sim... 28 7.2
At5g16150.1 68418.m01886 hexose transporter, putative strong sim... 28 7.2
At1g14810.1 68414.m01770 semialdehyde dehydrogenase family prote... 28 7.2
At3g12950.1 68416.m01613 expressed protein 28 9.5
At2g29620.1 68415.m03598 expressed protein 28 9.5
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 55.6 bits (128), Expect = 4e-08
Identities = 37/136 (27%), Positives = 60/136 (44%)
Frame = +1
Query: 346 RAPFETALHHAGYGCFQWLLLLSCGAVYAVCALSTTTLSFVLPATKNDFELSSSDKGRLT 525
R + AL G+G FQ +L G + A+ LSFV PA ++ + LS+ + +T
Sbjct: 7 RFTVDEALVAMGFGKFQIYVLAYAGMGWVAEAMEMMLLSFVGPAVQSLWNLSARQESLIT 66
Query: 526 ATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFG 705
+ GM +G+Y WG ++D GR+ S+ ++ + R G G
Sbjct: 67 SVVFAGMLIGAYSWGIVSDKHGRRKGFIITAVVTFVAGFLSAFSPNYMWLIILRCLVGLG 126
Query: 706 IIGATGPHLPXXSVTF 753
+ G GP L + F
Sbjct: 127 LGG--GPVLASWYLEF 140
>At5g14570.2 68418.m01709 transporter, putative similar to
trans-membrane nitrate transporter protein AtNRT2:1
[Arabidopsis thaliana] GI:3747058, high-affinity nitrate
transporter ACH1 [Arabidopsis thaliana] GI:3608362;
contains Pfam profile PF00083: Sugar (and other)
transporter
Length = 397
Score = 35.9 bits (79), Expect = 0.036
Identities = 29/119 (24%), Positives = 43/119 (36%)
Frame = +1
Query: 352 PFETALHHAGYGCFQWLLLLSCGAVYAVCALSTTTLSFVLPATKNDFELSSSDKGRLTAT 531
PF + H+ WL L SC ST ++ ++P +D LS+S
Sbjct: 31 PFSLSSPHSRAFHLAWLSLFSC-------FFSTFSIPPLVPVISSDLNLSASTVSAAGIA 83
Query: 532 PLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGI 708
G G L D G + +S+V S + F+ RFF GF +
Sbjct: 84 SFAGSIFSRLAMGPLCDLIGPRTSSAILSFLTAPVILSASLVSSPTSFILVRFFVGFSL 142
>At5g14570.1 68418.m01708 transporter, putative similar to
trans-membrane nitrate transporter protein AtNRT2:1
[Arabidopsis thaliana] GI:3747058, high-affinity nitrate
transporter ACH1 [Arabidopsis thaliana] GI:3608362;
contains Pfam profile PF00083: Sugar (and other)
transporter
Length = 493
Score = 35.9 bits (79), Expect = 0.036
Identities = 29/119 (24%), Positives = 43/119 (36%)
Frame = +1
Query: 352 PFETALHHAGYGCFQWLLLLSCGAVYAVCALSTTTLSFVLPATKNDFELSSSDKGRLTAT 531
PF + H+ WL L SC ST ++ ++P +D LS+S
Sbjct: 31 PFSLSSPHSRAFHLAWLSLFSC-------FFSTFSIPPLVPVISSDLNLSASTVSAAGIA 83
Query: 532 PLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGI 708
G G L D G + +S+V S + F+ RFF GF +
Sbjct: 84 SFAGSIFSRLAMGPLCDLIGPRTSSAILSFLTAPVILSASLVSSPTSFILVRFFVGFSL 142
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell
cycle control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = -3
Query: 744 RXXGKMRXRGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVTP 565
R K+R + + D E + ++ +E + +RG+ I+ S DG+ + R T
Sbjct: 69 RRGDKVRRKETSDDEELARRSRKDRKEANSGSEDDRGKRIEVDSDGDGERRVNKGRN-TD 127
Query: 564 EVRADAHSDE 535
VRAD SDE
Sbjct: 128 RVRADTSSDE 137
>At1g79820.2 68414.m09323 hexose transporter, putative similar to
hexose transporter GI:8347246 from (Solanum tuberosum);
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 495
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 511 KGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRF 690
+G + +T L G +GS F G +AD GR+ S+ +S G L RF
Sbjct: 95 EGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSALPMIVGASVSASTESLMGMLLGRF 154
Query: 691 FSGFGI-IG--ATGPHLPXXSVTFCR*GTET*CCAGSRCFGTVGN 816
G G+ IG T ++ S + R GT + C G +G+
Sbjct: 155 LVGIGMGIGPSVTALYVTEVSPAYVR-GTYGSSTQIATCIGLLGS 198
>At1g79820.1 68414.m09322 hexose transporter, putative similar to
hexose transporter GI:8347246 from (Solanum tuberosum);
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 495
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 511 KGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRF 690
+G + +T L G +GS F G +AD GR+ S+ +S G L RF
Sbjct: 95 EGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSALPMIVGASVSASTESLMGMLLGRF 154
Query: 691 FSGFGI-IG--ATGPHLPXXSVTFCR*GTET*CCAGSRCFGTVGN 816
G G+ IG T ++ S + R GT + C G +G+
Sbjct: 155 LVGIGMGIGPSVTALYVTEVSPAYVR-GTYGSSTQIATCIGLLGS 198
>At1g12940.1 68414.m01503 high-affinity nitrate transporter,
putative similar to trans-membrane nitrate transporter
protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058,
high-affinity nitrate transporter ACH1 [Arabidopsis
thaliana] GI:3608362
Length = 502
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/91 (21%), Positives = 36/91 (39%)
Frame = +1
Query: 436 CALSTTTLSFVLPATKNDFELSSSDKGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXX 615
C +ST +LP + + L+++D G + G G D G +
Sbjct: 57 CFVSTFAAPPLLPVIRENLNLTATDIGNAGIASVSGAVFARIVMGTACDLFGPRLASAAL 116
Query: 616 XXXXXXXXXXSSVVQSFSGFLACRFFSGFGI 708
++ ++S GF+ RFF+GF +
Sbjct: 117 TLSTAPAVYFTAGIKSPIGFIMVRFFAGFSL 147
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 31.9 bits (69), Expect = 0.58
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = -1
Query: 815 FPTVPKHLEPAQHHVSVPQRQKVTEXXGR*GPVAPMIPNPEKNLQARNPEKDCTTLDRNA 636
FP +PK P + P+ KV E P P IP PE P+ D N
Sbjct: 114 FPEIPKPELPKMPEIPKPELPKVPEIQKPELPKMPEIPKPELPKFPEIPKPDLPKFPEN- 172
Query: 635 ARASKSRAP-MMAIFRPRASAKLPQKYEP 552
SK P +M +P A K+P+ +P
Sbjct: 173 ---SKPEVPKLMETEKPEA-PKVPEIPKP 197
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles PF01846:
FF domain, PF00397: WW domain
Length = 946
Score = 31.9 bits (69), Expect = 0.58
Identities = 30/113 (26%), Positives = 48/113 (42%)
Frame = -3
Query: 858 VRDDQETRSPGNSIVPHGPKTPRACTASRLCASTTESHRXXGKMRXRGSDDSEPGEEPAS 679
V + QE RS G+ V G T+ + A E R K+R D + +
Sbjct: 764 VEESQEYRSIGDESVSQG-LFEEYITSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKD 822
Query: 678 QEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVTPEVRADAHSDERRGGE 520
+E RE +E+G+ K +DG+ +A V ++ H DE+R G+
Sbjct: 823 KERREKEREREKEKGKERSKREESDGE-TAMDV--------SEGHKDEKRKGK 866
>At3g03090.1 68416.m00305 sugar transporter family protein similar
to xylose permease [Bacillus megaterium] GI:1924928;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 503
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +1
Query: 427 YAVCALSTTTLSFVLPATKND--FELSSSDKGRLTATPLIGMCVGSYFWGNLADARGRKX 600
Y + A S +S P ++LSS D G +T+ L G +GS ++AD GR+
Sbjct: 63 YEIGATSCAIMSLKSPTLSGISWYDLSSVDVGIITSGSLYGALIGSIVAFSVADIIGRRK 122
Query: 601 XXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGI 708
+ V FS + R G GI
Sbjct: 123 ELILAAFLYLVGAIVTVVAPVFSILIIGRVTYGMGI 158
>At5g17010.1 68418.m01992 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 503
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 427 YAVCALSTTTLSFVLPATKND--FELSSSDKGRLTATPLIGMCVGSYFWGNLADARGRK 597
Y + A S T+S P+ + LSS D G +T+ L G GS +AD GR+
Sbjct: 63 YEIGATSCATISLQSPSLSGISWYNLSSVDVGLVTSGSLYGALFGSIVAFTIADVIGRR 121
>At3g43790.3 68416.m04680 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 535 LIGMCVGSYFWGNLADARGRK 597
+IG + S FWG LAD GRK
Sbjct: 86 MIGRALTSIFWGKLADRYGRK 106
>At3g43790.2 68416.m04679 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 535 LIGMCVGSYFWGNLADARGRK 597
+IG + S FWG LAD GRK
Sbjct: 86 MIGRALTSIFWGKLADRYGRK 106
>At3g43790.1 68416.m04678 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 478
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 535 LIGMCVGSYFWGNLADARGRK 597
+IG + S FWG LAD GRK
Sbjct: 86 MIGRALTSIFWGKLADRYGRK 106
>At2g07727.1 68415.m00977 cytochrome b (MTCYB) (COB) (CYTB) contains
Pfam profile PF00033: Cytochrome b(N-terminal)/b6/petB;
ontains Pfam profile PF00032: Cytochrome
b(C-terminal)/b6/petD; 99% identical to apocytochrome B
(GI:6851014), cytochrome b (GI:402962), and Cytochrome b
(Swiss-Prot:P42792) [Arabidopsis thaliana]
Length = 393
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 367 LHHAGYGC---FQWLLLLSCGAVYAVCALSTTTLSFVLPATKNDFELSSSDKGRLTATPL 537
L+HA Y F W L G V + + T + +VLP + F ++ +A P+
Sbjct: 107 LYHASYSSPREFVWCL----GVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPV 162
Query: 538 IGMCVGSYFWGNLA 579
+G + ++ WG +
Sbjct: 163 VGDTIVTWLWGGFS 176
>At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1556
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 118 KISFASQIKVLISYILSINTNGIKRTDKQSVS-RPLREILSLCDISCKLQFVN*VWCLVI 294
K+S ++ + +Y S+ ++ +K ++ Q +S R RE+ L + CKL+ +N C +
Sbjct: 1258 KLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 1317
Query: 295 ISVALMEE 318
SV+ + E
Sbjct: 1318 ESVSDLSE 1325
>At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1544
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 118 KISFASQIKVLISYILSINTNGIKRTDKQSVS-RPLREILSLCDISCKLQFVN*VWCLVI 294
K+S ++ + +Y S+ ++ +K ++ Q +S R RE+ L + CKL+ +N C +
Sbjct: 1244 KLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 1303
Query: 295 ISVALMEE 318
SV+ + E
Sbjct: 1304 ESVSDLSE 1311
>At5g66420.1 68418.m08377 expressed protein
Length = 655
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -3
Query: 615 SSNDGDLSASSVRQVTPEVRADAHSDERRGGEAALV--GGRQLEVILGGGQHEAERGRAE 442
S N G +A SV + V+A A + R + ++ GG I G + E R +
Sbjct: 566 SGNIGAKTAVSVEESVVRVQAIADAARRFNPDIIVLCHGGP----ISGPEEAEFVLKRTQ 621
Query: 441 -CADGVHGAAGQQQQPLEASVTGVMQR 364
C G +GA+ ++ P+E ++T +Q+
Sbjct: 622 GCVHGFYGASSMERLPVEQAITNTVQK 648
>At5g16150.3 68418.m01888 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +1
Query: 511 KGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRF 690
+G + ++ L G VGS+ G LAD GR + QS + R
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRL 205
Query: 691 FSGFGI 708
+G GI
Sbjct: 206 LAGIGI 211
>At5g16150.2 68418.m01887 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +1
Query: 511 KGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRF 690
+G + ++ L G VGS+ G LAD GR + QS + R
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRL 205
Query: 691 FSGFGI 708
+G GI
Sbjct: 206 LAGIGI 211
>At5g16150.1 68418.m01886 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +1
Query: 511 KGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRF 690
+G + ++ L G VGS+ G LAD GR + QS + R
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRL 205
Query: 691 FSGFGI 708
+G GI
Sbjct: 206 LAGIGI 211
>At1g14810.1 68414.m01770 semialdehyde dehydrogenase family protein
similar to SP:O31219 Aspartate-semialdehyde
dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH)
{Legionella pneumophila}; contains Pfam profiles
PF02774: Semialdehyde dehydrogenase dimerisation domain,
PF01118: Semialdehyde dehydrogenase NAD binding domain
Length = 375
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 689 NLQARNPEKDCTTLDRNAARASKSRAPMMAIFRPRASAKLPQKYEPTHIPMSGVA-VRRP 513
NLQ NP LD N AR +AP + I RAS P + ++ V +RR
Sbjct: 288 NLQFENP------LDENTAREILKKAPGVYIIDDRASNTFPTPLDVSNKDDVAVGRIRRD 341
Query: 512 LSED 501
+S+D
Sbjct: 342 VSQD 345
>At3g12950.1 68416.m01613 expressed protein
Length = 558
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 783 TASRLCASTTESHRXXGKMRXRGSDDSEPGEEPASQEPR 667
T+SRL + E ++ DD E EP S EP+
Sbjct: 23 TSSRLSNAAEERANYFSNLQKEEDDDDEVSPEPVSTEPK 61
>At2g29620.1 68415.m03598 expressed protein
Length = 747
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -3
Query: 714 SDDSEPGEEPASQEPREGL-HNAGQERGQSIQK*SSN-----DGDLSASSVRQVTPEV 559
SD+ EP E QE E N G+ER Q ++ +S+ + + S +S R V P++
Sbjct: 606 SDEHEPSERTTDQEFEEPYERNDGEERQQLVEAEASDVNHHGNSEESVTSPRSVLPDM 663
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,549,953
Number of Sequences: 28952
Number of extensions: 350425
Number of successful extensions: 1087
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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