Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B03
         (908 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    26   0.35 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   4.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.8  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 514 LVWSPDCSFVVLAYGNGVVGFFDLTASNLFNI 609
           LVW   C+FVV  Y   VV   +LT   L  I
Sbjct: 164 LVWREVCTFVVQVYPRLVVNTINLTFLTLLMI 195


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 647 EHSKPSGLEHSIGILKRFEAVKSKKP 570
           +H +P+ L+ + G LK+F A+K K P
Sbjct: 66  KHLEPN-LDVNQGNLKKFNALKLKNP 90


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 646 SDNTHAVADVIFMPLRVKDTKWNWEVLIVTYDGKLRGYLV 765
           SD T  +++V  + L +K  KWN     +T+D   +  LV
Sbjct: 141 SDVTLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLV 180


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 646 SDNTHAVADVIFMPLRVKDTKWNWEVLIVTYDGKLRGYLV 765
           SD T  +++V  + L +K  KWN     +T+D   +  LV
Sbjct: 67  SDVTLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLV 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,625
Number of Sequences: 336
Number of extensions: 4861
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)