Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B03
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0282 + 2093451-2094668                                           32   0.72 
06_02_0069 - 11126235-11127538,11128361-11128421                       31   1.3  
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141...    29   3.9  
11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834                28   8.9  
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38...    28   8.9  
06_01_0560 - 3977456-3977527,3978069-3978182,3978264-3978335,397...    28   8.9  
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813...    28   8.9  
01_05_0007 - 17017106-17017804,17017936-17018025                       28   8.9  

>11_01_0282 + 2093451-2094668
          Length = 405

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 712 NWEVLIVTYDGKLRGYLVSQTEGFK-IHHTFKFSGGVSAVAYSDRHPLXTLLEYXRSG 882
           +W+ L+   DG LRG LV   E  +  + +F F GG  +   S R P  +LL   RSG
Sbjct: 63  DWDGLLNPLDGALRGELVRYGEFVRAAYASFDFDGGAPSSYGSCRFPTSSLLR--RSG 118


>06_02_0069 - 11126235-11127538,11128361-11128421
          Length = 454

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +1

Query: 730 VTYDGKLRGYLVSQTEGFKIHHTFKFSGGVSAVAYSDRHPLXTLLEYXRSGXIVPXPVN 906
           V YDG    ++V  TE  K+   F +    SAV   D+ P   L++   S  +   P N
Sbjct: 159 VDYDGHNDNHMVFNTESMKLKKEFSYLYQFSAVKGIDQKPELNLVKKKSSRYVYGNPAN 217


>05_04_0284 -
           19813179-19813340,19813464-19813748,19813850-19814131,
           19814224-19814531,19814654-19814927,19815807-19816175,
           19816372-19816434,19817495-19817789,19817818-19818008,
           19818123-19818428,19818516-19818638
          Length = 885

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +1

Query: 658 HAVADVIFMPLRVKDTKWNWEVLIVTYDGKLRGYLVSQTEGFKIHHTFKF 807
           H + D+I +   VK TK    VLI     K RGY  ++    K H   KF
Sbjct: 496 HNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKF 545


>11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834
          Length = 273

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 313 GPKKNLIDSVTAHKENHQKWHIALGD 390
           GP  N++ SV      HQ+WH   GD
Sbjct: 125 GPHGNVVVSVELRAGGHQRWHEVEGD 150


>08_01_0058 +
           388989-389102,389226-389337,389457-389483,389787-389859,
           389958-390061,390144-390358,390429-390528,390739-390805,
           391628-391716,391810-391948,392057-392157,392921-393088,
           393302-393510
          Length = 505

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 499 SQWRKLVWSPDCSFVVLAYG 558
           S +R+L WSPD SF+VL  G
Sbjct: 230 SFFRRLAWSPDGSFLVLPAG 249


>06_01_0560 -
           3977456-3977527,3978069-3978182,3978264-3978335,
           3978428-3978497,3978608-3978705,3978791-3978992,
           3979074-3979141,3979960-3980358
          Length = 364

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 387 SESDMPLLVVFFMSSYTVY*ILLGSKKFKPLP 292
           S   +PLL++   ++Y  Y  LL S+   PLP
Sbjct: 8   SRGALPLLLISLSAAYLTYTALLSSRSLLPLP 39


>03_02_0400 -
           8135283-8135490,8136047-8136213,8136289-8136477,
           8136560-8136655,8136746-8136874,8136947-8137123,
           8137256-8137366,8138592-8138792,8139022-8139186,
           8139293-8139527,8139618-8139745,8139833-8139928,
           8140017-8140112,8140252-8140325,8140393-8140462,
           8140556-8140665,8140753-8140906,8141040-8141155,
           8141259-8141379,8141464-8141641,8142331-8142489,
           8142619-8142732,8142821-8143000,8143098-8143177
          Length = 1117

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = +1

Query: 460 TIAARTTVNRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFF 579
           ++A + ++ +DP     +++WSPD +   +AY   +V  +
Sbjct: 400 SMALQASLVKDPTVSVNRIIWSPDGTLFGVAYSRHIVQIY 439


>01_05_0007 - 17017106-17017804,17017936-17018025
          Length = 262

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 786 FEPFCLRYQISTQFTVICHY*NFPVPFCVFDPKWH 682
           +E F +  + S Q+T++ H+  F  P    DP++H
Sbjct: 28  YEQFVVNIRNSAQYTILRHHDQFKRPRDTTDPRFH 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,590,415
Number of Sequences: 37544
Number of extensions: 472326
Number of successful extensions: 1131
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)