Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A24
(928 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 32 0.74
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 30 2.3
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 30 3.0
07_03_1228 - 25009736-25010965 29 4.0
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 29 4.0
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 29 5.2
01_06_1485 + 37703696-37703815,37703970-37704044,37704598-377046... 29 5.2
12_01_0468 + 3661177-3661626 29 6.9
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 29 6.9
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 29 6.9
05_03_0326 - 12444830-12445074,12445218-12445425 28 9.2
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 28 9.2
01_05_0619 - 23737178-23737378,23737460-23737516,23737597-237377... 28 9.2
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 289 KRKGKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLE 468
+++ K E + + E E+ G D + E +++ + + +E + D +EKLEEK E
Sbjct: 222 EKEDKEEETKKDNEKEKEQLMGTD-EKEKEKEKEDENEEEKLEEEEKKDKEEKLEEKEKE 280
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 325 QEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEK 459
+E EED D ++ YS+ G+ D DEGE D ++ E K
Sbjct: 64 EEDDEEEDGDEDDDDEEYSDEEGEDD---EDDEGEEDEEDGSEPK 105
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 319 TEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLE 468
TE+E EED G+D +G L EGE D +E L ++E
Sbjct: 112 TEEEEEEEEDDGLDPLFSETFGAAGWDPLGMPRMEGEGDEEEMLGGGLIE 161
>07_03_1228 - 25009736-25010965
Length = 409
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +1
Query: 298 GKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEII 474
G+ E E+E E + G + D+ E + + + +E EN+ +E+ E + ++
Sbjct: 333 GEEEEEEEEEEEEEEPEEGAEEEEDDEEEDEEEEEEEEDIEEDENEEEEEEVEDTMPVV 391
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 325 QEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+E ++D + + +N E SD+ +D E+D E+L EK+ + +G
Sbjct: 545 EELDEDQDISDNDSEENDDELELDSDMDEENDVSESDDDEELSEKLDDSDEG 596
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 283 KGKRKGKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKV 462
+G+R Y+ +QE S E+ A N N E G + DE E D ++ E+
Sbjct: 169 RGQRLHPYQESEDDQESSEEQPAQDRRENGNDIEEDGNEEEVDGGDEAEADGDDEDGEEE 228
Query: 463 LE 468
E
Sbjct: 229 QE 230
>01_06_1485 +
37703696-37703815,37703970-37704044,37704598-37704699,
37704792-37704845,37705030-37705122,37705215-37705307,
37707150-37707254,37707356-37707454,37707558-37707899
Length = 360
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 274 TMPKGKRKGKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGE 429
TMPK R G + +++E EE+ + N+ E +K +H GE
Sbjct: 303 TMPKSSRTGYWSDAGSDEEEKEEEERPEE--NEEEEEDEYDKRVKEVHASGE 352
>12_01_0468 + 3661177-3661626
Length = 149
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 310 HXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLE 468
H E+E EE+ ++ D E + + + I +E + +E+L E+V E
Sbjct: 59 HSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEEEVKEEEEELREQVQE 111
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 283 KGKRKGKYEHXRTEQ-EYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGEND 435
+GK+K K E+ E + EED D N++ + DL+ DE E +
Sbjct: 197 QGKKKKKTENWMEEDSDEEEEEDLDEDEDNEDEEDDDEHLDLEDFDDEEEEE 248
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +1
Query: 274 TMPKGKRKGKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLE 453
T RKG+++ R + Y + DAG + + SG + + E E D Q +
Sbjct: 58 TSSSSSRKGRHDDARHDGGYGDDGDAGALLASVRRLLLSGSAQDDAAEGEAEEDEQGQFP 117
Query: 454 EK 459
++
Sbjct: 118 KR 119
>05_03_0326 - 12444830-12445074,12445218-12445425
Length = 150
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 434 TVKRSWKRKCWRSSTG*ALXXXXXXXXXXXXXXXXXSAATSRPCSATSAPRSQTXWR 604
TV RSW+++C RSS+ L + S CS +++ ++ + WR
Sbjct: 3 TVDRSWRKRC-RSSSSQRLRLGFMRSLGEDNEEMFMARWLSSACSGSTSTKTMSRWR 58
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +1
Query: 322 EQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEK 447
E+E ++ED D +++N+S+ G D + + +E E + +E+
Sbjct: 431 EEELGTDEDETSDDSDENFSDEEG--DEEELEEEEEEEEEEE 470
>01_05_0619 -
23737178-23737378,23737460-23737516,23737597-23737755,
23739477-23739621,23739725-23740136,23740693-23740855
Length = 378
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 346 DAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEI 471
+ + +T +N E QSD H EGE++ +E+ E + E+
Sbjct: 201 EVSVTVTEENKQEDVPQSDEVEKHKEGESNEEEEKEPEDKEM 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,221,336
Number of Sequences: 37544
Number of extensions: 198666
Number of successful extensions: 564
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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