Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A17
         (942 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    79   2e-13
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    55   3e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    50   1e-04
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    46   0.001
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    46   0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    40   0.12 
UniRef50_A2D8V0 Cluster: U1 zinc finger family protein; n=1; Tri...    35   2.6  
UniRef50_Q640S7 Cluster: Fmnl1 protein; n=3; Xenopus|Rep: Fmnl1 ...    35   3.4  
UniRef50_P39523 Cluster: Uncharacterized protein YMR124W; n=2; S...    34   4.6  

>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 78.6 bits (185), Expect = 2e-13
 Identities = 55/121 (45%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
 Frame = +2

Query: 443 VCXLGALPXPRSLTRCARSFGCGXRYQLTQRR*YGYPXNQGITQEKTXXQKASKRPGTVK 622
           +C  G +P PRSLTR ARSFGCG RY+LT           G   E T    + +      
Sbjct: 30  ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDTRKTLSKEE----I 77

Query: 623 RPRCWRFSIGSAPLXEHHKXRRSXQRWPKPRQDX*DTRXFPLETPSCALLFXT--LPLXF 796
           RPR  RFSIGSAPL    K         + RQD  D R FPL  PSCALLF    LP+ F
Sbjct: 78  RPRRSRFSIGSAPLTSIAKSDAQIS-GGETRQDYKDPRRFPLVAPSCALLFLPFGLPVSF 136

Query: 797 R 799
           R
Sbjct: 137 R 137


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 54.8 bits (126), Expect = 3e-06
 Identities = 36/74 (48%), Positives = 39/74 (52%)
 Frame = +2

Query: 599 SKRPGTVKRPRCWRFSIGSAPLXEHHKXRRSXQRWPKPRQDX*DTRXFPLETPSCALLFX 778
           SK+  T    R  RFSIGSAPL    K      R  + RQD  DTR FPLE PSCALLF 
Sbjct: 2   SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQV-RGGETRQDYKDTRRFPLEAPSCALLFR 60

Query: 779 TLPLXFRNTXPAXS 820
             P    +T P  S
Sbjct: 61  --PCRLPDTCPPFS 72


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 49.6 bits (113), Expect = 1e-04
 Identities = 29/53 (54%), Positives = 31/53 (58%)
 Frame = +2

Query: 617 VKRPRCWRFSIGSAPLXEHHKXRRSXQRWPKPRQDX*DTRXFPLETPSCALLF 775
           V+ PR  RFSIGSAPL    K         + RQD  DTR FPL  PSCALLF
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGG-ETRQDYKDTRRFPLAAPSCALLF 95


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 21/32 (65%), Positives = 21/32 (65%)
 Frame = -3

Query: 607 PFAGLLXXCFFLXYPLIXWITVLPPLSELIPL 512
           P    L  C F  YPLI WITVLPPLSEL PL
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 26/57 (45%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 407 CXNESANXRGXAVCXLGALPXPRSLTRCARSFGCGXRYQL-TQRR*YGYPXNQGITQ 574
           C  + A  R  AV  L ALP  RS TRC RS GCG      +  R YG P  QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 39.5 bits (88), Expect = 0.12
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +1

Query: 523 AHSKAVIRLSTXSGDNXGKN 582
           AHSKAVIRLST SGDN GKN
Sbjct: 39  AHSKAVIRLSTESGDNAGKN 58


>UniRef50_A2D8V0 Cluster: U1 zinc finger family protein; n=1;
           Trichomonas vaginalis G3|Rep: U1 zinc finger family
           protein - Trichomonas vaginalis G3
          Length = 218

 Score = 35.1 bits (77), Expect = 2.6
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
 Frame = +3

Query: 699 GGRNPDRTIKIPGXSPWKPPRALSCSXPCRSXSGIPVPPFLPFXESGGXLSPXXXPLLGX 878
           GG + + T    G      P+ L    P  S S +P+PP +P       L P   P+   
Sbjct: 51  GGFSTNETEDTSGLPNTPQPKGLPKPNPTNSISPLPIPPVMPKPVISSTLPPIPPPVPRP 110

Query: 879 XQXPGVXXVSP--PKPWG 926
              P +  + P  PKP G
Sbjct: 111 SGPPTLPTIPPSLPKPVG 128


>UniRef50_Q640S7 Cluster: Fmnl1 protein; n=3; Xenopus|Rep: Fmnl1
           protein - Xenopus tropicalis (Western clawed frog)
           (Silurana tropicalis)
          Length = 1167

 Score = 34.7 bits (76), Expect = 3.4
 Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = +3

Query: 744 PWKPPRALSCSXP----CRSXSGIPVPPFLPFXESGGXLSPXXXPLLGXXQXPGVXXVSP 911
           P  PP  +S   P        SGIP PP LP  E G   +P   P +G    PGV    P
Sbjct: 617 PPPPPLPMSADVPPPPPLPELSGIPPPPPLPMGEQG---APPPPPSMG---APGVPPPPP 670

Query: 912 PKPWG 926
           P P G
Sbjct: 671 PPPSG 675


>UniRef50_P39523 Cluster: Uncharacterized protein YMR124W; n=2;
           Saccharomyces cerevisiae|Rep: Uncharacterized protein
           YMR124W - Saccharomyces cerevisiae (Baker's yeast)
          Length = 943

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +1

Query: 670 ASQXSTLXSKVAETPTGXLRYQAFPPGNPLVRSPVPDPAAXFPEYXSRXFSXSGKAVGXF 849
           A    T    +A  P   +  Q+FP GNPL+++P P P     +  S  +S S   +   
Sbjct: 243 AMAKQTKNGTLASLPPRAMSLQSFPNGNPLMQAPTPHPRFQPNKMVSANYSRSNSLMSGP 302

Query: 850 P 852
           P
Sbjct: 303 P 303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,107,140
Number of Sequences: 1657284
Number of extensions: 9746504
Number of successful extensions: 19343
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19281
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86549281324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)