Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A15
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   4.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.4  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 708 HW--IDSHSLKRVSMSLACQRYIGTHSYDKIY--EMSQELVS*YGL 583
           HW   DSHS    + SL      G +S  K+Y  E   E+V  YGL
Sbjct: 243 HWHITDSHSFPFTAESLPDLTKYGAYSPKKVYAPEEVAEIVE-YGL 287


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 416 NNCHNTSVRCTHVESV 369
           +NC N    CTHV ++
Sbjct: 496 SNCENEYCECTHVVNI 511


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 633 YDKIYEMSQELVS*YGLTSVNVVARVTESGTNFVW 529
           YD  Y+ ++ L+  + +  V  + R  +  T F W
Sbjct: 46  YDNFYQTTKSLLVLFQIMGVMPIERSGKGRTTFRW 80


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 633 YDKIYEMSQELVS*YGLTSVNVVARVTESGTNFVW 529
           YD  Y+ ++ L+  + +  V  + R  +  T F W
Sbjct: 46  YDNFYQTTKSLLVLFQIMGVMPIERSGKGRTTFRW 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,181
Number of Sequences: 336
Number of extensions: 3647
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)