Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A15
(860 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26753| Best HMM Match : BTK (HMM E-Value=3.9) 31 1.2
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 31 1.6
SB_30335| Best HMM Match : BESS (HMM E-Value=1.9) 26 4.5
SB_39713| Best HMM Match : BESS (HMM E-Value=1.9) 26 4.7
SB_40739| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-28) 29 4.9
SB_40436| Best HMM Match : EGF_CA (HMM E-Value=0.0038) 29 4.9
SB_11985| Best HMM Match : hATC (HMM E-Value=0.022) 29 4.9
SB_38006| Best HMM Match : hATC (HMM E-Value=0.049) 29 6.4
SB_29307| Best HMM Match : hATC (HMM E-Value=0.054) 29 6.4
SB_24646| Best HMM Match : hATC (HMM E-Value=0.024) 29 6.4
SB_10213| Best HMM Match : hATC (HMM E-Value=0.024) 29 6.4
SB_6514| Best HMM Match : hATC (HMM E-Value=0.024) 29 6.4
SB_57822| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_51068| Best HMM Match : hATC (HMM E-Value=0.024) 29 6.4
SB_48175| Best HMM Match : hATC (HMM E-Value=0.024) 29 6.4
SB_27538| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_54821| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8) 28 8.5
SB_52122| Best HMM Match : Toxin_9 (HMM E-Value=2.5) 28 8.5
>SB_26753| Best HMM Match : BTK (HMM E-Value=3.9)
Length = 194
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 406 ITLVCAAHTLSLCVTDANKILENQETELSKMHDQTIKKM 290
IT+ CA+HT+ CV N +L N+ T + + +KKM
Sbjct: 109 ITITCASHTIIACVLAHNHLLLNKRTRAT--YHVLLKKM 145
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+S F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 3515 RISPFLNDDCIINGLKAELPAYLAATADVVINKEERKVKWWHD--HKEQLPHWASAVKKV 3572
Query: 603 VL 608
+L
Sbjct: 3573 LL 3574
>SB_30335| Best HMM Match : BESS (HMM E-Value=1.9)
Length = 386
Score = 26.2 bits (55), Expect(2) = 4.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 378 NVCAAHTSVMTIVEERLSKFVNSSCVLSVPESY 476
NV AH S +T EER + F+N+ ++ + + Y
Sbjct: 58 NVVDAHASTLTKREERDAFFLNTQGIVQLVQRY 90
Score = 21.4 bits (43), Expect(2) = 4.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 585 GHIKKLVLATSRKF 626
GH+K +VLA RK+
Sbjct: 96 GHLKAVVLALLRKY 109
>SB_39713| Best HMM Match : BESS (HMM E-Value=1.9)
Length = 237
Score = 26.2 bits (55), Expect(2) = 4.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 378 NVCAAHTSVMTIVEERLSKFVNSSCVLSVPESY 476
NV AH S +T EER + F+N+ ++ + + Y
Sbjct: 134 NVVDAHASTLTKREERDAFFLNTQGIVQLVQRY 166
Score = 21.4 bits (43), Expect(2) = 4.7
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 585 GHIKKLVLATSRKF 626
GH+K +VLA RK+
Sbjct: 172 GHLKAVVLALLRKY 185
>SB_40739| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-28)
Length = 327
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 408 TIVEERLSKFVNSSCVLSVPESYMTLL 488
+ V+ RLS F++ SC +S ESY+ LL
Sbjct: 259 SFVQYRLSCFLSPSCSMSAAESYLFLL 285
>SB_40436| Best HMM Match : EGF_CA (HMM E-Value=0.0038)
Length = 676
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N +C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 575 RIFPFLNDNCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 632
Query: 603 VL 608
+L
Sbjct: 633 LL 634
>SB_11985| Best HMM Match : hATC (HMM E-Value=0.022)
Length = 865
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N +C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 572 RIFPFLNDNCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 629
Query: 603 VL 608
+L
Sbjct: 630 LL 631
>SB_38006| Best HMM Match : hATC (HMM E-Value=0.049)
Length = 130
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 29 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKLKWWHD--HKEQLPHWASAVKKV 86
Query: 603 VL 608
+L
Sbjct: 87 LL 88
>SB_29307| Best HMM Match : hATC (HMM E-Value=0.054)
Length = 235
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 134 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASGVKKV 191
Query: 603 VL 608
+L
Sbjct: 192 LL 193
>SB_24646| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 121
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 20 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 77
Query: 603 VL 608
+L
Sbjct: 78 LL 79
>SB_10213| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 105
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 4 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 61
Query: 603 VL 608
+L
Sbjct: 62 LL 63
>SB_6514| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 519 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 576
Query: 603 VL 608
+L
Sbjct: 577 LL 578
>SB_57822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 326 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASGVKKV 383
Query: 603 VL 608
+L
Sbjct: 384 LL 385
>SB_51068| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 281
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 180 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 237
Query: 603 VL 608
+L
Sbjct: 238 LL 239
>SB_48175| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 519 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 576
Query: 603 VL 608
+L
Sbjct: 577 LL 578
>SB_27538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 423 RLSKFVNSSCVLSVPESYMTLLAIHSCDLLRNF*RPKQNWCHFR*HAPQHLRWLGHIKKL 602
R+ F+N C+++ ++ + + D++ N K W H H Q W +KK+
Sbjct: 249 RIFPFLNDDCIINGLKAELPAYLAATADVVINTEERKVKWWHD--HKEQLPHWASAVKKV 306
Query: 603 VL 608
+L
Sbjct: 307 LL 308
>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 714 DNHWIDSHSLKRVSMSLACQRYIGTHSYDKIYEMSQ 607
D H + +L+R+S S+A R +GTH I Q
Sbjct: 472 DQHTTNIPNLRRISKSMAGLRMVGTHLVGSIIHSGQ 507
>SB_54821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 165 TKGFYYHRHEYK*YNYFTLPFC 100
T G Y++R E YNY++LPFC
Sbjct: 40 TVGPYHNRQET--YNYYSLPFC 59
>SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8)
Length = 420
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 714 DNHWIDSHSLKRVSMSLACQRYIGTHSYDKIYEMSQ 607
D H + +L+R+S S+A R +GTH I Q
Sbjct: 30 DQHTTNIPNLRRISKSMAGLRMVGTHLVGSIIHSGQ 65
>SB_52122| Best HMM Match : Toxin_9 (HMM E-Value=2.5)
Length = 155
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 550 KWHQFCLGL*KFRSKSHECIASKVMYDSG 464
+W+ +C G F ++H+C KV+ G
Sbjct: 71 RWNSYCCGSQTFDRRTHQCCHGKVLRKKG 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,581,794
Number of Sequences: 59808
Number of extensions: 450519
Number of successful extensions: 1049
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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