Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A15
         (860 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   3.9  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   5.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   6.8  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 594 KKLVLATSRKFCHNYECRYSVDMLMTLRRALNCANLSSGCLTWXSFSD 737
           +KL L  ++  C   E R    M+ + R+ L  ++  + CLT  +F+D
Sbjct: 26  EKLRLCGTKSMCR--EMRACTVMVSSDRKRLTASSAVNACLTRCAFTD 71


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -2

Query: 583 NQRKCCGACYRKWHQFCLGL 524
           N   C G C  K H  C GL
Sbjct: 48  NSVSCAGVCGSKHHTHCTGL 67


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 570 HLRWLGHIKKLVLATSR 620
           HL W+ H+K++ L  +R
Sbjct: 816 HLSWVPHVKEITLKATR 832


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,791
Number of Sequences: 2352
Number of extensions: 14849
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)