Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A10
(972 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.003
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.015
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.020
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.14
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.16
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.43
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.75
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/78 (32%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +3
Query: 663 PPPPXXGPPPXXP-SXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXARX 839
PP PPP P S G P PP+ PP PG P P A
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI--PGRSAPALPPLGNASR 411
Query: 840 XSPPXGXGVXXLPPFXPP 893
S P LPP PP
Sbjct: 412 TSTPPVPTPPSLPPSAPP 429
Score = 37.5 bits (83), Expect = 0.003
Identities = 31/120 (25%), Positives = 35/120 (29%), Gaps = 8/120 (6%)
Frame = +3
Query: 573 PXPPPXXXXXXXXXXXXXXXXXXXXXXPXSPPPPXXG-PPPXXPSXGXRGGX-------P 728
P PPP P +PPP G P P G P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 729 XXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXARXXSPPXGXGVXXLPPFXPPGPXXP 908
P PPS PP P G P P + +PP G+ PP P P P
Sbjct: 421 PSLPPSAPPSLPPS-APPSLPMG--APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 32.7 bits (71), Expect = 0.080
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = +3
Query: 756 GXPPSXPPPXXPPGXP---PPXXXPXXXARXXSP--PXGXGVXXLPPFXPPGPXXP 908
G P S P PP P PP P A P P G PP PP P P
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = +3
Query: 684 PPPXXPSXGXRGGXPXXXXXXXPXG-XPPSXPPPXXPPG---XPPPXXXPXXXARXXSPP 851
PPP P G P P G P PPP P PPP + +PP
Sbjct: 338 PPPPPPRSNAAGSIP-----LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Query: 852 ---XGXGVXXLPP 881
G LPP
Sbjct: 393 PAIPGRSAPALPP 405
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 684 PPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXARXXSPP 851
PPP PS RG P PP PPP P A PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNS-SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 26.2 bits (55), Expect = 7.0
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 10/90 (11%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXP--------PP 809
P PPP G P+ R P P PPP PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPP 312
Query: 810 XXXPXXXARXXSPPXGXGV--XXLPPFXPP 893
P PP G G LPP PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/52 (28%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPP-PXXPPGXPP 806
P P P PP PS P PP+ PP P P P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 25.8 bits (54), Expect = 9.2
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = -2
Query: 497 GXPXPGGGEXGXAPHXXAPXPRGGXHSXRXGTP-----PPPXPXXPAPQTERGXGGPSFY 333
G P G G + P PR P PPP P AP T R P
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR-QPPPLSS 381
Query: 332 TRAGGGAEAXPP 297
+RA A PP
Sbjct: 382 SRAVSNPPAPPP 393
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.015
Identities = 32/90 (35%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Frame = -3
Query: 907 GXXGPGGXXGGRXXTPSPXGGEXX---RAXXXGXXXG-GGXPGGXXGG-GXEGGXPXGXX 743
G G GG GG P GG G G GG PGG GG G GG P G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 742 XXXXXGXPPRXPXEGXXGGGPXXGGGGXXG 653
G GGGP GGG G
Sbjct: 249 GGL-----------GGFGGGPGGFGGGPGG 267
Score = 30.3 bits (65), Expect = 0.43
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -3
Query: 907 GXXGPGGXXGGRXXTPSPXGGEXXRAXXXGXXXGGGXPGGXXGG-GXEGG 761
G G GG GG P GG G GG PGG GG G GG
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPG-GFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.020
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXA 833
P P P PP PS G G PP PP PP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGI------PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 834 RXXSPPXGXGVXXLPPFXPPGPXXP 908
+PP LPP P P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 32.3 bits (70), Expect = 0.11
Identities = 23/85 (27%), Positives = 24/85 (28%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXA 833
P P P PP PS P P P PP P PP P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 834 RXXSPPXGXGVXXLPPFXPPGPXXP 908
PP +PP PP P
Sbjct: 1179 ----PPVPKPAAGVPPVPPPSEAPP 1199
Score = 31.9 bits (69), Expect = 0.14
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXA 833
P P P PP PS P P P S PP P P P A
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPP--VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 834 RXXSPPXGXGVXXLPPFXPPGPXXP 908
PP +PP PP P
Sbjct: 1198 ----PPVPKPSVGVPPVPPPSTAPP 1218
Score = 30.7 bits (66), Expect = 0.32
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 666 PPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXARXXS 845
PPP PP PS G P P PP P PP P A S
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPT-PSAGLPPVPVPTAKAPPVPAPSSEAPSVS 1250
Query: 846 PP 851
P
Sbjct: 1251 TP 1252
Score = 29.9 bits (64), Expect = 0.57
Identities = 26/117 (22%), Positives = 27/117 (23%), Gaps = 3/117 (2%)
Frame = +3
Query: 567 PGPXPPPXXXXXXXXXXXXXXXXXXXXXXPXSPPPPXXGPPPXXPSXGXRGGXPXXXXXX 746
P P P P P P P PP PS
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 747 XPX---GXPPSXPPPXXPPGXPPPXXXPXXXARXXSPPXGXGVXXLPPFXPPGPXXP 908
P PP P PP P P A +PP PP P P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Score = 29.5 bits (63), Expect = 0.75
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +3
Query: 660 SPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXARX 839
+PP P P P P P PP P P P P P A
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGA-PSAPPPVPAPSSEIPSIPAPSGAPPVPAPS 1089
Query: 840 XSPPXGXGVXXLPPFXPPGPXXP 908
PP PP P P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVP 1112
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 660 SPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXP 821
SPPPP PP P G PP PPP PPP P
Sbjct: 731 SPPPP---PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 666 PPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXP 791
P P P P P GG P G P PPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.75
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 654 PXSPPPPXXG-PPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPG 797
P PP P G PPP P G G P PP PPP G
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPP----------PPPPPPPAVSAG 788
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +3
Query: 684 PPPXXPSXGXRGGXPXXXXXXXPX---GXPPSXPPPXXPPGXPPPXXXPXXXA 833
PPP P+ P P G PP PPP G PP P A
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 750 PXGXPPSXPPPXXPPGXPPPXXXPXXXARXXSPP 851
P P PPP G PPP P A PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 6/72 (8%)
Frame = +3
Query: 654 PXSPPP-PXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPP-----PXXPPGXPPPXX 815
P PPP P PP + P P PPS P P PP PPP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Query: 816 XPXXXARXXSPP 851
A S P
Sbjct: 207 SQAPVANTSSRP 218
Score = 30.7 bits (66), Expect = 0.32
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Frame = +3
Query: 672 PXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPP-----PXXPPGXPPPXXXPXXXAR 836
P P P P R P P S PP P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 837 XXSPPX-GXGVXXLPPFXPPGP 899
S P V +PP PP P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 0.75
Identities = 22/86 (25%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 660 SPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXPXXXARX 839
+PP P PPP P+ + P PP P PP P
Sbjct: 164 APPIPSSLPPPAQPAAPVKS---PPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSS 220
Query: 840 XSPPXGXG---VXXLPPFXPPGPXXP 908
+PP G P F GP P
Sbjct: 221 FAPPAGHAPNVTSESPKFPNRGPSIP 246
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 750 PXGXPPSXPPPXX--PPGXPPPXXXP 821
P G PP PPP PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect(2) = 0.16
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 750 PXGXPPSXPPPXXPPG 797
P PPS PPP PPG
Sbjct: 16 PGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 768 SXPPPXXPPGXPPPXXXPXXXARXXSPP 851
S PP PP PPP P PP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 22.6 bits (46), Expect(2) = 0.16
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXP 701
P PPPP PP P
Sbjct: 9 PPPPPPPPGFEPPSQP 24
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.43
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPP 806
P PPPP PP P P G + PPP P PP
Sbjct: 236 PAPPPPP---PPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.75
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = +3
Query: 654 PXSPPPPXXGPPPXXPSXGXRGGXPXXXXXXXPXGXPPSXPPPXXPPGXPPPXXXP 821
P PPPP PPP PS P G PPS PPP P P P
Sbjct: 1705 PTPPPPPMSVPPP--PSA-----------PPMPAG-PPSAPPPPLPASSAPSVPNP 1746
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = -3
Query: 907 GXXGPGGXXGGRXXTPSPXGGEXXRAXXXGXXXGGGXPGGXXGGGXEGGXPXG 749
G G GG GGR + GG GGG GG GGG GG G
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGF------GGGSRGGF-GGGSRGGSRGG 181
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 892 GGXXGGRXXTPSPXGGEXXRAXXXGXXXGGGXPGGXXGGGXEGGXPXG 749
GG G R GG G GGG G G G GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 27.5 bits (58), Expect = 3.0
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -3
Query: 865 TPSPXGGEXXRAXXXGXXXGGGXPGGXXGGGXEGGXPXGXXXXXXXGXPPRXPXEGXXGG 686
TP GG G GG G GG GG G G R G GG
Sbjct: 4 TPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG----ARGGRGGRGGARGGRGG 59
Query: 685 GPXXGGGGXXG 653
GG G
Sbjct: 60 SSGGRGGAKGG 70
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,802,231
Number of Sequences: 5004
Number of extensions: 26189
Number of successful extensions: 241
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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