Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A09
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749...    30   3.1  
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042     29   7.1  
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361...    28   9.4  
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506...    28   9.4  

>07_01_0893 +
           7484598-7484744,7484837-7484902,7494387-7494530,
           7494860-7495235,7495904-7496017,7496282-7496454,
           7496562-7496669,7497311-7497377,7497791-7497904,
           7498121-7498257,7498727-7498813,7498962-7498986,
           7499044-7499266,7499770-7499947,7500039-7500152,
           7500249-7500380,7500488-7500588,7500720-7500933
          Length = 839

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 456 EVVKTRLQSSKGVGIPPTQPPPSDNTANNRKICSKIPKHQEAK 584
           ++ + R Q    V      PP   N  NN  +CS++PK  + K
Sbjct: 179 KIKEGRKQGGSNVAHNGNAPPLEQNHPNNTDVCSQLPKTPQTK 221


>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
          Length = 819

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +3

Query: 501 PPTQPPPSDNTA-NNRKICSKIPKHQEAKWGYRRTMGAMFAYSKQADRMLMSYNCQVQQY 677
           PP  P PS NTA  + +    IP+ Q A   Y   +G  FA   +A      Y  ++   
Sbjct: 17  PPPPPAPSGNTAVEDSEAGPCIPRLQAATGDYTPWLGQEFASEHEAYEFYRYYAWKLGFS 76

Query: 678 ARAGHA-RTRQNELIHASDTLCN 743
            R  +A ++R+   I +   +C+
Sbjct: 77  VRREYANKSRKTGEITSRKFVCS 99


>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
            3611984-3612217,3614113-3614138,3614446-3614633,
            3615707-3617670,3617938-3618423,3618527-3618894
          Length = 2207

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = -2

Query: 692  VSSPRVLLYLTIVRHQHTICLLAVCEHRTHCTSVAPFGLLMFRYLGTYFSVISSVI 525
            V    +L + T+  H H+        H TH   + P  +     L   FS +S VI
Sbjct: 1252 VEMEELLCFFTVEHHYHSFAYNRKVIHNTHSVGMKPIAIGQSFVLLLVFSTVSVVI 1307


>09_04_0163 -
           15249816-15249920,15250032-15250163,15250463-15250629,
           15251259-15251448,15252530-15252661,15253275-15253382,
           15253513-15253608,15253702-15253809,15253917-15254089,
           15255026-15255401,15255887-15256030,15256125-15256799,
           15256917-15256982,15257082-15257249
          Length = 879

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 477 QSSKGVGIPPTQPPPSDNTANNRKICSKIPKHQEAK 584
           Q    V      PP   N  NN  +CS++PK  + K
Sbjct: 418 QGGNNVAHNGNAPPLEQNHPNNTDVCSQLPKTPQTK 453


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,791
Number of Sequences: 37544
Number of extensions: 382243
Number of successful extensions: 1240
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)