Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A07
         (836 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4KH77 Cluster: Putative uncharacterized protein; n=8; ...    35   2.2  
UniRef50_Q53730 Cluster: Polyketide synthase; n=1; Streptomyces ...    35   2.2  
UniRef50_Q4C2U5 Cluster: Putative uncharacterized protein; n=5; ...    35   2.9  
UniRef50_A3E3W1 Cluster: Alkyl-hydroperoxide reductase; n=1; Pfi...    33   8.9  

>UniRef50_Q4KH77 Cluster: Putative uncharacterized protein; n=8;
           Pseudomonas|Rep: Putative uncharacterized protein -
           Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
          Length = 257

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +2

Query: 62  GSAAGLCQGYPACNAXAPTCGWGRVGPGCDGRDGVQRRRSASGLAAXTDVTR 217
           G+ A    G    N   P C WG  G G DG +G   R  A+G     ++ R
Sbjct: 139 GAGAPGYVGLDGANGQEPGCTWGSAGRGADGDNGGDGRPGAAGAQVRVELPR 190


>UniRef50_Q53730 Cluster: Polyketide synthase; n=1; Streptomyces
           ambofaciens|Rep: Polyketide synthase - Streptomyces
           ambofaciens
          Length = 1198

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
 Frame = -3

Query: 273 QNKVPHYGYARLSGREXXXXXXXXXXXSPEAERRRWTPS-RPSHPGPTRP---QPHVGAX 106
           + + PH+  +  SGR               + RRRW+P  RP  PG   P   +P V   
Sbjct: 511 RRRPPHHRRSPASGRPSTRATSSPWPPPRASTRRRWSPCCRPCRPGTATPASTRPSVPGG 570

Query: 105 ALHAGXPWHSPAALP 61
               G PW S    P
Sbjct: 571 TGSPGSPWRSRPRRP 585


>UniRef50_Q4C2U5 Cluster: Putative uncharacterized protein; n=5;
           Crocosphaera watsonii WH 8501|Rep: Putative
           uncharacterized protein - Crocosphaera watsonii
          Length = 360

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -3

Query: 162 PSRPSHPGPTRPQPHVGAXALHAGXPWHSPAALPESKV 49
           P RPS PGP RP+ H     LH G  W SP   P+  +
Sbjct: 156 PPRPSQPGPGRPRKH--GEILHPG--WDSPEIPPDEDI 189


>UniRef50_A3E3W1 Cluster: Alkyl-hydroperoxide reductase; n=1;
           Pfiesteria piscicida|Rep: Alkyl-hydroperoxide reductase
           - Pfiesteria piscicida
          Length = 174

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 129 VALGPDATAETASSDVARPLDWPRXLT*LASTTRDQTNAH 248
           V +GPD T E    D++ P DWP  +T L    + + NAH
Sbjct: 134 VLIGPDRTIEKIWLDISDPEDWP--VTPLIHIAQSEVNAH 171


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,104,596
Number of Sequences: 1657284
Number of extensions: 11758005
Number of successful extensions: 33344
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33275
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)