Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A07
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739...    33   0.37 
02_03_0279 + 17250347-17252098                                         29   3.5  
07_03_1276 - 25387539-25388317,25388639-25388888                       29   6.1  
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527...    29   6.1  
02_04_0297 + 21709873-21711375                                         29   6.1  
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204...    29   6.1  
09_01_0101 - 1558889-1558989,1559105-1559214,1559300-1559396,156...    28   8.0  

>01_05_0655 -
           23972488-23973152,23973193-23973241,23973883-23973940,
           23974184-23974215,23975961-23976040,23976509-23977898
          Length = 757

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 168 WTPSRPSHPGPTRPQPHVGAXALHAGXPWH 79
           W   RP   GP+   PH G   +    PWH
Sbjct: 471 WAVKRPRRSGPSHAPPHAGPGTIAIVGPWH 500


>02_03_0279 + 17250347-17252098
          Length = 583

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = +3

Query: 81  ARXTLRATRPPQHVAGVALGPDATAETASSDVARPLDWPRXLT*LASTTRDQT 239
           A+  L +T PPQ       G  +T  TA+   A PLD P   T   +TT   T
Sbjct: 139 AKPDLDSTAPPQPKEEGVDGYGSTTATATVTAAPPLDEPAAATATTTTTTTTT 191


>07_03_1276 - 25387539-25388317,25388639-25388888
          Length = 342

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 125 WGRVGPGCDGRDGVQRRRSAS 187
           WG  G G DG DG+++R+ +S
Sbjct: 24  WGDAGKGRDGGDGLKKRKGSS 44


>04_03_0747 -
           19251617-19251781,19252377-19252502,19252606-19252716,
           19252931-19253679,19254034-19254167,19254595-19254740,
           19255166-19255336,19255977-19256828
          Length = 817

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -3

Query: 189 PEAERRRWTPSRPSHPGPTRPQPHVGAXALHAGXPWHSPAALPES 55
           P A     TP+    P PTRP   V A  L A  P  +P+A P +
Sbjct: 134 PPARTPMPTPTPTPTPTPTRPPVPVWAAPLPARTPTPTPSAPPRA 178


>02_04_0297 + 21709873-21711375
          Length = 500

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 177 RRRWTPSRPSHPGPTRPQPHVGAXALHAGXPWH 79
           RRR+   +P  PGPT P P +G   L  G  +H
Sbjct: 25  RRRYAGGKPLPPGPT-PLPLIGNLHLVGGGTFH 56


>01_05_0292 +
           20518668-20519090,20519213-20519281,20520204-20520473,
           20520734-20521084,20521251-20521528,20522755-20523099,
           20523346-20523911,20525155-20525528
          Length = 891

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -3

Query: 162 PSRPSHPGPTRPQPHVGAXALHAGXP 85
           PS P H G TR     GA  LHA  P
Sbjct: 752 PSSPPHHGKTREDEEEGALGLHACQP 777


>09_01_0101 -
           1558889-1558989,1559105-1559214,1559300-1559396,
           1560462-1560537,1561577-1561666,1561972-1562070
          Length = 190

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 153 PSHPGPTRPQPHVGAXALHAGXPWHSPAALPESKVLTECLYT 28
           P HPGP + +PH  A AL +   +    A+ +S + TE + T
Sbjct: 26  PRHPGPLKVRPHWEALALQS--EYVELVAVNDSFITTEYMVT 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,883,038
Number of Sequences: 37544
Number of extensions: 322362
Number of successful extensions: 982
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)