Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A06
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 33 0.28
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 33 0.28
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 33 0.28
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 32 0.66
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 32 0.66
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 32 0.66
AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z p... 31 0.87
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 30 2.0
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 30 2.7
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 30 2.7
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 30 2.7
U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center... 29 3.5
Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical p... 29 6.1
Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical p... 29 6.1
Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical p... 29 6.1
Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 6.1
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical pr... 28 8.1
AJ011936-1|CAB41353.1| 66|Caenorhabditis elegans cyclic AMP-de... 28 8.1
AF100307-8|AAC68937.2| 250|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 707 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 766
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 767 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 811
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 741 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 800
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 801 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 845
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 837 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 896
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 897 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 941
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 707 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 766
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 767 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 811
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 741 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 800
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 801 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 845
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 837 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 896
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 897 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 941
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 741 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 800
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 801 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 845
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +2
Query: 203 PTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLL 367
P++ + +L + +V +GG +R T+ ++ TN SGG
Sbjct: 837 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 896
Query: 368 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEA 505
LSG P + Q + P A SS S S + QHQ+ A
Sbjct: 897 SATNQLSGAPSSTGASSQQYHPKAPSSSSSSSTNPPH-QHQLTHNA 941
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 182 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 280
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 182 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 280
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 182 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 280
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z
protein 1 protein.
Length = 306
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 584 DTYHAVLFLQLL*NRIRVLVQHPHWKGPLHQLGVEFFLGLDSWSAHWNMH 435
+TY ++ ++ I ++ W G H+ GVE+++G +SW W H
Sbjct: 226 ETYAGGIYKEVTDEDIDHIISVHGW-GVDHESGVEYWIGRNSWGEPWGEH 274
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +2
Query: 224 RSTLTRKTTNALSSQSVGSGGSAKRKTALN-KNQIPKTNVHSGGDGCLLLERTTLSGIPL 400
R + R +TNA S+ VG G + TA N + IP T V G G + R + PL
Sbjct: 121 RVLMNRSSTNAGLSRMVGGGYDQQLPTAPNGRLMIPSTAVRVPGSG-MASPRLQTTPQPL 179
Query: 401 IQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEAL 508
+ + AY + Q + + DEE L
Sbjct: 180 TKSQKAKDEMKMAYQVGREEALQQRRNDLEDDEENL 215
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 431 PDAYSSEHSMSQDQGKIQHQVDEEALSNEDVEPAPVYDFRAIEETAPRDK 580
PD S + + V+EE + ED+E D+ +EE+AP D+
Sbjct: 110 PDQLESAENQEPRSELVSSGVEEEIIEEEDIEEIEESDY--VEESAPADE 157
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 431 PDAYSSEHSMSQDQGKIQHQVDEEALSNEDVEPAPVYDFRAIEETAPRDK 580
PD S + + V+EE + ED+E D+ +EE+AP D+
Sbjct: 110 PDQLESAENQEPRSELVSSGVEEEIIEEEDIEEIEESDY--VEESAPADE 157
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 431 PDAYSSEHSMSQDQGKIQHQVDEEALSNEDVEPAPVYDFRAIEETAPRDK 580
PD S + + V+EE + ED+E D+ +EE+AP D+
Sbjct: 110 PDQLESAENQEPRSELVSSGVEEEIIEEEDIEEIEESDY--VEESAPADE 157
>U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center
kinase family protein2 protein.
Length = 829
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 498 KRPFPMRMLNQHPYTILEQLKKQHRVISVCIPVSLNPLYIRVLKSI-VLTETCSGLEDAK 674
KRP P ++L HP+ + + R + + + +Y R+ K++ LTE S ++DA
Sbjct: 259 KRPSPEKLLTSHPFVLGSLSARMTRDLLDKVNGAPTDVYDRMSKTVDDLTEEESDMDDAP 318
Query: 675 S 677
S
Sbjct: 319 S 319
>Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +2
Query: 251 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 430
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 431 PDAYSS 448
A ++
Sbjct: 63 NPAQNT 68
>Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +2
Query: 251 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 430
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 431 PDAYSS 448
A ++
Sbjct: 63 NPAQNT 68
>Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +2
Query: 251 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 430
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 431 PDAYSS 448
A ++
Sbjct: 63 NPAQNT 68
>Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +2
Query: 251 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 430
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 431 PDAYSS 448
A ++
Sbjct: 63 NPAQNT 68
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 527 PAPVYDFRAIEETAPRDKCLYSSFFEP--PLHQS 622
P V FR + TAP+D LYS+ P P+H S
Sbjct: 1607 PQRVSSFRTGDPTAPKDSPLYSNIRPPTSPIHAS 1640
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/97 (19%), Positives = 37/97 (38%)
Frame = +2
Query: 227 STLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQ 406
S + T+ S+ S +K A + +P T + + ++ + ++ L+
Sbjct: 317 SQIQNLTSIGSSASSSAQPSQPAKKAAPKRKTVPNTAKNLAQNQQIMPPQAQITPTKLVM 376
Query: 407 DDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEALSNE 517
D P + S H S D +Q+DE S +
Sbjct: 377 DPPTTTMVPSSSQSNHMYSNDGFTTYNQMDEPGTSQQ 413
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/97 (19%), Positives = 37/97 (38%)
Frame = +2
Query: 227 STLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQ 406
S + T+ S+ S +K A + +P T + + ++ + ++ L+
Sbjct: 303 SQIQNLTSIGSSASSSAQPSQPAKKAAPKRKTVPNTAKNLAQNQQIMPPQAQITPTKLVM 362
Query: 407 DDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEALSNE 517
D P + S H S D +Q+DE S +
Sbjct: 363 DPPTTTMVPSSSQSNHMYSNDGFTTYNQMDEPGTSQQ 399
>Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical
protein C08B11.2 protein.
Length = 507
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)
Frame = +2
Query: 308 LNKNQIPKTNVHSGGDGCLLLERTTLS------GIPLIQDDNDQGWRPDAY--------- 442
L N +PK N + +E+ TL+ G P +Q N G R D
Sbjct: 364 LRPNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQMQNIVGIRLDEIEQIEENERL 423
Query: 443 --SSEHSMSQDQGKIQHQVDEEALSNEDVEP 529
SS+ S+ + GK+ +++EE ED +P
Sbjct: 424 QKSSKSSIEYEVGKVSEKMEEECFVEEDSKP 454
>AJ011936-1|CAB41353.1| 66|Caenorhabditis elegans cyclic
AMP-dependent protein kinasecatalytic subunit protein.
Length = 66
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +2
Query: 251 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 430
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 431 PDA 439
A
Sbjct: 63 NPA 65
>AF100307-8|AAC68937.2| 250|Caenorhabditis elegans Hypothetical
protein T12B5.13 protein.
Length = 250
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 536 RVLVQHPHWKGPLH-QLGVEFFLGLDSWSAHWNMHQVAILGHYHLELKEYHLEWFSLIID 360
R L+ H H++ L+ +L LD W +H L + +HL+WF + +D
Sbjct: 121 RQLMFHFHFETILNSELTARNITSLDLWKCAKKLHLYDSLLENRQIVHLFHLKWFEIQLD 180
Query: 359 NRP 351
+ P
Sbjct: 181 SFP 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,486,879
Number of Sequences: 27780
Number of extensions: 352641
Number of successful extensions: 1042
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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