Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A05
         (928 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M69175-1|AAA36011.1|  173|Homo sapiens H-protein protein.             149   1e-35
D00723-1|BAA00625.1|  173|Homo sapiens protein ( Homo sapiens mR...   149   1e-35
BT009827-1|AAP88829.1|  173|Homo sapiens glycine cleavage system...   149   1e-35
BC020922-1|AAH20922.1|  173|Homo sapiens glycine cleavage system...   149   1e-35
BC000790-1|AAH00790.1|  173|Homo sapiens glycine cleavage system...   149   1e-35
AY533031-1|AAS59848.1|  125|Homo sapiens mitochondrial glycine c...   149   1e-35
AY310735-1|AAP50260.1|  173|Homo sapiens glycine cleavage system...   149   1e-35
CR457072-1|CAG33353.1|  173|Homo sapiens GCSH protein.                146   1e-34

>M69175-1|AAA36011.1|  173|Homo sapiens H-protein protein.
          Length = 173

 Score =  149 bits (362), Expect = 1e-35
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+ GT L   DE GALESVKA
Sbjct: 49  SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 162


>D00723-1|BAA00625.1|  173|Homo sapiens protein ( Homo sapiens mRNA
           for hydrogen carrier protein, a component of an enzyme
           complex, glycine synthase (EC 2.1.2.10). ).
          Length = 173

 Score =  149 bits (362), Expect = 1e-35
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+ GT L   DE GALESVKA
Sbjct: 49  SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 162


>BT009827-1|AAP88829.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score =  149 bits (362), Expect = 1e-35
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+ GT L   DE GALESVKA
Sbjct: 49  SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 162


>BC020922-1|AAH20922.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score =  149 bits (362), Expect = 1e-35
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+ GT L   DE GALESVKA
Sbjct: 49  SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 162


>BC000790-1|AAH00790.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score =  149 bits (362), Expect = 1e-35
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+ GT L   DE GALESVKA
Sbjct: 49  SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 162


>AY533031-1|AAS59848.1|  125|Homo sapiens mitochondrial glycine
           cleavage system H-protein precursor protein.
          Length = 125

 Score =  149 bits (362), Expect = 1e-35
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+ GT L   DE GALESVKA
Sbjct: 1   SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 60

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 61  ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 114


>AY310735-1|AAP50260.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score =  149 bits (362), Expect = 1e-35
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+ GT L   DE GALESVKA
Sbjct: 49  SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 162


>CR457072-1|CAG33353.1|  173|Homo sapiens GCSH protein.
          Length = 173

 Score =  146 bits (354), Expect = 1e-34
 Identities = 65/114 (57%), Positives = 87/114 (76%)
 Frame = +2

Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
           S RK+T++HEWVT +  IGTVG+S +AQE+LGDVV+  LP+  T L   DE GALESVKA
Sbjct: 49  SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVWTKLNKQDEFGALESVKA 108

Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 685
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEE 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,622,737
Number of Sequences: 237096
Number of extensions: 2276048
Number of successful extensions: 7842
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7841
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)