Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A05
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83103-2|CAB05472.1| 148|Caenorhabditis elegans Hypothetical pr... 148 5e-36
Z71263-2|CAA95820.1| 146|Caenorhabditis elegans Hypothetical pr... 147 1e-35
U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical pr... 33 0.38
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 32 0.51
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 32 0.51
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 32 0.51
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 32 0.51
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 32 0.51
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 29 3.6
Z34799-1|CAA84315.1| 147|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z83103-2|CAB05472.1| 148|Caenorhabditis elegans Hypothetical
protein D1025.2 protein.
Length = 148
Score = 148 bits (359), Expect = 5e-36
Identities = 60/128 (46%), Positives = 98/128 (76%)
Frame = +2
Query: 323 LKYSTGGSSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECG 502
+++++ G R YT +HEW+ +++ +GTVG++++A E LGDVVF +LP+ G +++ GD G
Sbjct: 17 IRFASNG--RLYTKKHEWIVVNQSVGTVGITDFATEQLGDVVFIELPEAGVEIEKGDSTG 74
Query: 503 ALESVKAASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTE 682
A+ESVKAAS+IY+P+SG + EKN +ED+P +IN S +KGWL+RL+I ++N+L+TE
Sbjct: 75 AVESVKAASDIYAPVSGKILEKNTKLEDEPGIINKSPLEKGWLYRLEITSNEQLNELLTE 134
Query: 683 EESRNFEN 706
E+ F++
Sbjct: 135 EQYNKFKS 142
>Z71263-2|CAA95820.1| 146|Caenorhabditis elegans Hypothetical
protein F52A8.5 protein.
Length = 146
Score = 147 bits (356), Expect = 1e-35
Identities = 62/120 (51%), Positives = 90/120 (75%)
Frame = +2
Query: 344 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 523
S R YT +HEWV ++ +GTVG++++A E LGDVVF +LPD GT++ GD GA+ESVKA
Sbjct: 20 SGRLYTKKHEWVLVENGVGTVGITDFATEQLGDVVFIELPDEGTEISKGDSTGAVESVKA 79
Query: 524 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEESRNFE 703
AS+IY+P+SGTVT+KN +E++ LIN S ++KGWL++LK+ E+ L+ EE+ F+
Sbjct: 80 ASDIYAPISGTVTQKNVKLEEEAGLINKSPFEKGWLYKLKVKSADELEKLLNEEQYAKFK 139
>U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical
protein M02D8.5 protein.
Length = 669
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 121 PIDYTLNIFEAHLKFQITFRYQSIRFVIYKKY*QQNGNTEMFIT--NSENLQIEASFTVK 294
P+ T + F + Q IRF +Y Y QN FIT N +N++I F +
Sbjct: 71 PLSPTTEFSSCSINFSTSGNRQGIRFAVYDFYTNQNQKDSFFITGSNGQNVKI-TGFATE 129
Query: 295 HQTNILY 315
+ + Y
Sbjct: 130 DEPVVYY 136
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 486 ALRSVPGSGSCAKTTSPRDSWA 421
ALRS+PG+G CA +P WA
Sbjct: 623 ALRSIPGNGRCADCGNPSSEWA 644
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 486 ALRSVPGSGSCAKTTSPRDSWA 421
ALRS+PG+G CA +P WA
Sbjct: 671 ALRSIPGNGRCADCGNPSSEWA 692
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 486 ALRSVPGSGSCAKTTSPRDSWA 421
ALRS+PG+G CA +P WA
Sbjct: 827 ALRSIPGNGRCADCGNPSSEWA 848
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 486 ALRSVPGSGSCAKTTSPRDSWA 421
ALRS+PG+G CA +P WA
Sbjct: 827 ALRSIPGNGRCADCGNPSSEWA 848
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 486 ALRSVPGSGSCAKTTSPRDSWA 421
ALRS+PG+G CA +P WA
Sbjct: 672 ALRSIPGNGRCADCGNPSSEWA 693
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 457 LCKNNITERFLGIFANPNCTY-IFVYCNPFMSISIFP**STCAVLQA 320
LC N++T +LG+ C Y +FV+C + + + C +L A
Sbjct: 84 LCVNSVTTGYLGMIGASFCNYPLFVFCAGSIGLGSWMGGCVCCILLA 130
>Z34799-1|CAA84315.1| 147|Caenorhabditis elegans Hypothetical
protein F34D10.3 protein.
Length = 147
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 732 LXILVSQHLFSKFLDSSSVMRSFISLCLIIF 640
L +L + + FLD+SS + +I LCLI+F
Sbjct: 14 LDLLATTICLALFLDNSSGDKQYIFLCLIVF 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,798,826
Number of Sequences: 27780
Number of extensions: 376503
Number of successful extensions: 844
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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