Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_C18
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 31 0.78
11_06_0195 - 21138029-21138389,21139796-21140052 31 1.0
06_03_0218 + 18219956-18220555 31 1.0
03_04_0029 - 16610182-16611753 30 1.4
06_01_0062 - 529833-530917,531392-531434 29 3.2
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 3.2
06_02_0069 - 11126235-11127538,11128361-11128421 29 4.2
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009 29 4.2
11_03_0109 - 10103163-10103262,10103469-10103800,10103963-10104121 28 5.5
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722 28 5.5
04_03_0799 - 19805190-19805749,19806316-19806403 28 5.5
01_03_0126 + 12741397-12743022 28 5.5
12_02_0204 - 15502331-15502459,15502875-15503129 28 7.3
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 28 7.3
09_04_0687 + 19465594-19465780,19465994-19466022,19466731-194668... 28 7.3
05_03_0361 - 12961101-12961201,12961683-12961772,12961910-129619... 28 7.3
04_03_0705 + 18880541-18880906,18881280-18881303 28 7.3
03_06_0528 - 34526038-34526164,34526250-34526500,34526584-345268... 28 7.3
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565... 28 7.3
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 28 7.3
11_01_0409 - 3096372-3097052,3097324-3098652 27 9.7
10_08_0295 - 16581014-16583071 27 9.7
09_06_0345 + 22428356-22428547,22428920-22429363 27 9.7
08_02_0707 - 20212190-20214592 27 9.7
05_03_0157 - 9027777-9027862,9028142-9029357 27 9.7
03_02_0942 - 12595108-12595347,12596227-12596362,12596917-12597083 27 9.7
03_02_0213 + 6480521-6480644,6482347-6482499,6482582-6482980,648... 27 9.7
02_05_0267 - 27284781-27284957,27285082-27285126,27285858-272859... 27 9.7
02_04_0607 - 24302582-24303075,24303150-24304197 27 9.7
02_02_0400 + 9836045-9837115,9837474-9838577 27 9.7
02_01_0726 + 5440341-5440661,5441574-5441620,5442917-5442977,544... 27 9.7
01_03_0155 + 13274537-13274741,13274827-13274864,13274909-132749... 27 9.7
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 31.1 bits (67), Expect = 0.78
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 251 VHAAPIVHAASLGYAHGHDTYAHPKYDYAYSVADPHTG-DHKSQHESRDGGAVHGSYSLV 427
V AA + SL D PK ++ + T H+S HE+R G + SL+
Sbjct: 2646 VEAATEIEDGSLN--RDQDDITSPKASQEDALEEVGTELPHESLHENRHGAKDEQTLSLI 2703
Query: 428 EPD-GSVRKVDYTAD 469
EPD G+ K+ AD
Sbjct: 2704 EPDTGNAEKLPNEAD 2718
>11_06_0195 - 21138029-21138389,21139796-21140052
Length = 205
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 413 YHVRHHHRGSRAGSCGHRCGGQPR-SKHSRIWGEHRCRGHGRSQEKPRGRWGQR 255
+H +HH + + G GG+ + +RI E + RG + RWG+R
Sbjct: 37 FHQQHHRQAVASAEAGAGAGGEVSPAVAARIRLEEKLRGAAAAPSSSLSRWGRR 90
>06_03_0218 + 18219956-18220555
Length = 199
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = -2
Query: 443 RNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPR--- 273
R + R GSS +R R SR G G GG + R + G GR + + R
Sbjct: 120 REGRRRGGSSGGLRGKRRASRGGGGGGDAGGGDGAAGRRTVEAAQAAGGGRQRGRERRAT 179
Query: 272 GRWGQRGLXG 243
GRW RG G
Sbjct: 180 GRW--RGTTG 187
>03_04_0029 - 16610182-16611753
Length = 523
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -3
Query: 187 RNEPRHSVPGHHDGRCSGTKLPQRGGMAGDQRWRQ 83
R P H PGH G+ G GG D RW +
Sbjct: 100 RKSPAHRAPGHTGGKKGGGGKGGGGGSDRDMRWAE 134
>06_01_0062 - 529833-530917,531392-531434
Length = 375
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 35 SSAKCSPKCSSLAPCWLPPTLVSCHTTTL---RQFRPRASSVMMPRHTMPRLITP 190
++ +CSP + P +P V C TL R RP + + P L+TP
Sbjct: 16 AATRCSPAAAPPRPVRIPRVRVRCCEDTLGVPRSRRPTHDTELAQSQRFPELVTP 70
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +2
Query: 200 MPHPLSMQLH*STPPLXVHAAPIVHAASLGYAHGHDTYA--HPKYDYAYSVADPHTGDHK 373
+PH + ++ +T P+ ++PI SL Y+ Y+ P Y+ S P + +
Sbjct: 1639 LPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYN 1698
Query: 374 SQHESRDGGAVHGSYSLVEPDGS 442
S SYS P S
Sbjct: 1699 PTSPSYSYSPTSPSYSPTSPSYS 1721
>06_02_0069 - 11126235-11127538,11128361-11128421
Length = 454
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +2
Query: 293 AHGHDTY--AHPKYDYAYSVADPHTG-DHKSQHESRDGGAV 406
AHGHD A K+ Y Y+ +P G +H + H D V
Sbjct: 362 AHGHDHVHLAKKKFSYYYTFGNPEDGHEHANHHGGYDNHIV 402
>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
Length = 768
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = -3
Query: 256 VDXQGRRGLVELHGQWVRHNEQGRNEPRHSVPGHHDGRCSGTKLPQRG----GMAGDQRW 89
V + RRG Q E GR + P HD R G + +RG +Q W
Sbjct: 320 VRDRSRRGCAACIEQDQDEEEDGRGDDDRDAPADHDDRARGGRRGRRGHNNDHPRANQNW 379
Query: 88 RQPTR 74
R R
Sbjct: 380 RSRDR 384
>11_03_0109 - 10103163-10103262,10103469-10103800,10103963-10104121
Length = 196
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = -2
Query: 431 ARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQRG 252
ARRG R H SR S CG P S+IW R G ++++ R RW Q G
Sbjct: 3 ARRGGD---RLQHGNSRGESV---CGS-PNPLPSQIWLNIRELEKGAARQRGRWRWQQEG 55
>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
Length = 740
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 214 QWVRHNEQGRNEPRHSVPGHHDGRCS 137
Q RHNE G +E PG+H CS
Sbjct: 454 QNARHNEDGVDESSDGGPGYHVNACS 479
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 371 CGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKP 276
C H C P+ K H C GHG KP
Sbjct: 122 CYHCCPAPPKPKPKPCECTHHCGGHGGGCNKP 153
>01_03_0126 + 12741397-12743022
Length = 541
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 35 SSAKCSPKCSSLAPCWLPP 91
S + CSP +S +PC LPP
Sbjct: 81 SGSSCSPPAASASPCALPP 99
>12_02_0204 - 15502331-15502459,15502875-15503129
Length = 127
Score = 27.9 bits (59), Expect = 7.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 411 PCTAPPSRLSCW 376
PC+ PP+RL CW
Sbjct: 54 PCSPPPARLHCW 65
>11_04_0474 +
18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 374 SCG-HRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQR 255
SC HRC G ++HSR + +G S+ + GR G+R
Sbjct: 13 SCSMHRCTGSTNAQHSRNAQANHRQGAQGSRRRRFGRGGRR 53
>09_04_0687 +
19465594-19465780,19465994-19466022,19466731-19466803,
19467237-19467311,19467583-19467644,19467727-19467795,
19468447-19468475,19468553-19468760,19468867-19469100,
19469591-19470598
Length = 657
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 169 SVPGHHDGRCSGTKLPQRGGMAG 101
S+PG+HD + S K +RG +G
Sbjct: 460 SLPGYHDSKASDNKKVKRGSFSG 482
>05_03_0361 -
12961101-12961201,12961683-12961772,12961910-12961980,
12962079-12962158,12962264-12962324,12963620-12963681,
12963826-12963833,12964273-12964609,12964946-12965089,
12965235-12965339
Length = 352
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 274 VDDGGSVDXQGRRGLVELHGQWVRHNEQGR 185
+ DGG +G RG+VE G W R R
Sbjct: 153 ITDGGGEAERGERGVVEEEGLWWREGTADR 182
>04_03_0705 + 18880541-18880906,18881280-18881303
Length = 129
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 141 HRPS*CPGTLCLGSLRPC-SLCRTHCPCSS 227
HR G + G LRP S CR HCP S
Sbjct: 84 HRRRELAGKIPFGPLRPDGSACRPHCPAKS 113
>03_06_0528 -
34526038-34526164,34526250-34526500,34526584-34526804,
34526963-34527017
Length = 217
Score = 27.9 bits (59), Expect = 7.3
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Frame = +2
Query: 107 HTTTLRQFRPRASSVMMPRHTMPRL---ITPLLIMPHPLSMQLH*STPPLXVHAAPIVHA 277
+ TT PRA++ ++ PR I+PL P ++ S L + +++
Sbjct: 54 NATTSPLASPRAAANVVSPLASPRAAGDISPLAASPGRAQQEMSSSRCTLALRRLERMNS 113
Query: 278 ASLGYAHGHDTYA--HPKYDYAYSV----ADPHTGDHKSQHES 388
A T A HP Y++S A PH GDH+ Q S
Sbjct: 114 MPSPLARTVMTRADDHPYQSYSHSEPPSPAAPHAGDHRHQRSS 156
>03_05_0845 -
28155065-28155374,28156201-28156342,28156375-28156505,
28156591-28156784,28156859-28156969,28157234-28157399,
28157501-28157668,28157766-28158787
Length = 747
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 395 GGAVHGSYSLVEPDGSVRKVDYTADDHHGFNA 490
GG + G V PDG+ + + AD HG A
Sbjct: 93 GGRIEGQGVFVGPDGATYRGAWAADRRHGVGA 124
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 8 PMISHCSXLSSAKCSPKCSSLAPCWLPPTLVSC 106
P+I+HCS + S +C+ K LA L PT C
Sbjct: 239 PIIAHCSHVRSERCTDKQGPLA-IVLAPTRELC 270
>11_01_0409 - 3096372-3097052,3097324-3098652
Length = 669
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 344 VADPHTGDHKSQHESRDGGAVHGSYSLVEPDGS-VRKVDYTADDHH 478
V + H G H H+S+ + G Y + DGS + +VD +D H
Sbjct: 428 VYNHHQGHHTVIHDSQRNLVLTGPYRAISADGSFLIEVDTNNEDVH 473
>10_08_0295 - 16581014-16583071
Length = 685
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -2
Query: 434 QARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRG---HGRSQEKPRGRW 264
+A G+ + R H R + G C G+ R++HS RCR S PRG+
Sbjct: 334 RAAEGARHWSRTPHPSGRQRAHGDGCQGRSRTRHSSRC-SCRCRSRRTRSPSSLTPRGQD 392
Query: 263 GQRGLXGA 240
G GA
Sbjct: 393 GTGDAGGA 400
>09_06_0345 + 22428356-22428547,22428920-22429363
Length = 211
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +2
Query: 53 PKCSSLAPCWLPPTLVSCHTTTLRQFRPRASSVMMPRHTMPRLITPLLIMPHPLSMQLH* 232
P+ +L P V C R + S MMP T+P T P P +LH
Sbjct: 135 PQRDTLLMAGRPLNGVGCWRMDCRLRSSQISHHMMP--TLPNYDTAR--RPQPSLQKLHV 190
Query: 233 STPPLXVHAAPIVH 274
P L +H A +VH
Sbjct: 191 GHPVLSLHDAHLVH 204
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = -2
Query: 413 YHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGH 297
+H HHH + GSC H HS GH
Sbjct: 484 FHEEHHH--AHGGSCSHSHSHSHSHSHSHSHSHSHVHGH 520
>05_03_0157 - 9027777-9027862,9028142-9029357
Length = 433
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 53 PKCSSLAPCWLPPTLVSC 106
P +L PC LPP L SC
Sbjct: 383 PSVDTLTPCLLPPWLASC 400
>03_02_0942 - 12595108-12595347,12596227-12596362,12596917-12597083
Length = 180
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 371 CGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRW 264
C CGG+PR K + R R + GRW
Sbjct: 93 CTIVCGGEPRKKPYELQQIETARNRQRVSHRRSGRW 128
>03_02_0213 +
6480521-6480644,6482347-6482499,6482582-6482980,
6483158-6483234,6483990-6485312
Length = 691
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 329 DYAYSVADPHTGDHKSQHESRDGGAVHGSYSLVEPDGSVRK--VDYTADDHHGF-NAVVH 499
+YA S D G KSQ + RD G +P + +K V ++ + H F NAV H
Sbjct: 162 EYASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNH 221
>02_05_0267 -
27284781-27284957,27285082-27285126,27285858-27285923,
27286043-27286114,27286225-27286350,27286563-27287217,
27287313-27287521
Length = 449
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 413 YHVRHHHRGSRAGSCGHR 360
+H HHH+ ++ GSC H+
Sbjct: 169 HHHHHHHQLTKEGSCNHQ 186
>02_04_0607 - 24302582-24303075,24303150-24304197
Length = 513
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 464 RCSLLYVRNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRI 324
R L + + H G VRHHHRG AG+ G + G + H R+
Sbjct: 72 RAGLRFQQLHHHHHGH-VDVRHHHRGG-AGAGGAQQGPFQWADHPRL 116
>02_02_0400 + 9836045-9837115,9837474-9838577
Length = 724
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +2
Query: 38 SAKCSPKCSSLA---PCWLPPTLVSC---HTTTLRQFRP 136
+A CSP CS++ P W+ P L++ TT +R + P
Sbjct: 385 AAVCSPWCSAVPPSYPAWITPLLLNAADVGTTNIRYYSP 423
>02_01_0726 +
5440341-5440661,5441574-5441620,5442917-5442977,
5442978-5443035,5443303-5443463,5443692-5443808,
5443888-5443989,5444834-5444908,5444996-5445084,
5445171-5445220,5445562-5445641,5445744-5445953,
5446103-5446170,5446363-5446423,5446719-5447081
Length = 620
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 446 VRNHQARRGSSYHVRHHHRGSRAGS 372
V +H G +H HHH GS A +
Sbjct: 564 VDHHHHHHGHHHHGHHHHEGSSAAA 588
>01_03_0155 +
13274537-13274741,13274827-13274864,13274909-13274968,
13275117-13275176,13277072-13277146,13277233-13277346
Length = 183
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 425 RGSSYHVRHHHRGSRAGSCG 366
+GSS+H HHH G G G
Sbjct: 30 QGSSHHHHHHHSGGGGGGGG 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,212,410
Number of Sequences: 37544
Number of extensions: 430082
Number of successful extensions: 1828
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -