Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_C18
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 34 0.075
U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81489-7|CAB04009.1| 225|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 30 1.2
AF295927-1|AAL83724.1| 377|Caenorhabditis elegans paraoxonase-l... 30 1.2
AF003141-2|AAK21482.2| 377|Caenorhabditis elegans Mechanosensor... 30 1.2
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 2.8
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 2.8
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 2.8
AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein. 29 2.8
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 29 3.7
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 29 3.7
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.7
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.7
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 28 6.5
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 27 8.6
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 27 8.6
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/85 (24%), Positives = 30/85 (35%)
Frame = +2
Query: 254 HAAPIVHAASLGYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVHGSYSLVEP 433
H AP H + HGH + AH + + A H G H H + HG +
Sbjct: 433 HHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHG 492
Query: 434 DGSVRKVDYTADDHHGFNAVVHKTP 508
+ + HHG + H P
Sbjct: 493 HHG----SHHSPAHHGHHGEHHHAP 513
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = -2
Query: 440 NHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWG 261
+H + +H HHH + G GH H G H GHG G G
Sbjct: 554 SHHSPAHHGHHGEHHHAPAHHGHHGHH------GSHGVHHGHHESHGHGHHAPAHHGHHG 607
Query: 260 QRGL 249
+ G+
Sbjct: 608 EHGV 611
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 272 HAASLGYAHG-HDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVHGSYS 421
H G HG H + AH + A+ H G H H+ ++ HG +S
Sbjct: 669 HHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHS 719
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +2
Query: 272 HAASLGYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVHGSYSLVEPDGSVRK 451
H + HGH AH + + V H G H + + + G HG++ P
Sbjct: 587 HGHHESHGHGHHAPAHHGHHGEHGV---HHGHHGAGYGAHHGH--HGAHHHHAPHHEHH- 640
Query: 452 VDYTADDHHGFNAVVH 499
++ D HHG + V H
Sbjct: 641 -EHHGDHHHGSHGVHH 655
>U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical
protein F53A9.2 protein.
Length = 83
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -2
Query: 437 HQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHG 294
H G +H HHH S GH G H +G H HG
Sbjct: 34 HVHTDGGHHHGHHHHHHSFLHELGHALTGHHHHHHGHHFGHHHHHHHG 81
>Z81489-7|CAB04009.1| 225|Caenorhabditis elegans Hypothetical
protein C55A1.9 protein.
Length = 225
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 74 PCWLPPTLVSCHTTTLRQ--FRPRASSVMMPRHTMPRLITPLLIMPHPLSMQLH*STPPL 247
PC LP + + T T + R S V P + +P I P P P M S PPL
Sbjct: 16 PCSLPSPMATKPTKTNEGILWDFRGSIVYEPLNPLPNYIPPRASPPSPPKMNGKYSLPPL 75
Query: 248 XVHAAPIVHAASLG-YAHG 301
+ +P+V + G + HG
Sbjct: 76 TM--SPLVEPSVTGSFDHG 92
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 404 RHHHRGSRAGSCGHRCGG 351
R HHRG R G GHR GG
Sbjct: 73 RRHHRGHRHGGGGHRHGG 90
>AF295927-1|AAL83724.1| 377|Caenorhabditis elegans paraoxonase-like
protein MEC-6 protein.
Length = 377
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/93 (18%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 161 RHTMPRLITPLLIMPHPLSMQLH*STPPLXVHAAPIVHAASLGYAHGHDTYAH-PKYDYA 337
+ T L+ ++++ P+ + + T + + A P++H ++ Y H + H P
Sbjct: 262 KDTTLELLYEMMLLTSPIGVFVESKTGDIWIAAHPVIHESAWHYTHPENQNIHSPSQILR 321
Query: 338 YSVADPHTGDHKSQHESRDGGAVHGSYSLVEPD 436
+ + ++ + DG + S S+V D
Sbjct: 322 IRIQEEGNSWVTTEPYANDGATISASSSVVFTD 354
>AF003141-2|AAK21482.2| 377|Caenorhabditis elegans Mechanosensory
abnormality protein6 protein.
Length = 377
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/93 (18%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 161 RHTMPRLITPLLIMPHPLSMQLH*STPPLXVHAAPIVHAASLGYAHGHDTYAH-PKYDYA 337
+ T L+ ++++ P+ + + T + + A P++H ++ Y H + H P
Sbjct: 262 KDTTLELLYEMMLLTSPIGVFVESKTGDIWIAAHPVIHESAWHYTHPENQNIHSPSQILR 321
Query: 338 YSVADPHTGDHKSQHESRDGGAVHGSYSLVEPD 436
+ + ++ + DG + S S+V D
Sbjct: 322 IRIQEEGNSWVTTEPYANDGATISASSSVVFTD 354
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 374 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 258
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 374 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 258
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Frame = +2
Query: 227 H*STPPLXVHAAP-----IVHAASLGYAHGH-DTYAH-PKYDYAYSVADPHTGDHKSQHE 385
H P VH AP VH + G HGH DT+ H + + H G ++S +E
Sbjct: 16 HGGYAPPPVHGAPGYMPPTVHVHTDGGHHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYE 75
Query: 386 SRDGGAVHGSY 418
S HG +
Sbjct: 76 SHHHHGHHGHH 86
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 374 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 258
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein.
Length = 159
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 374 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 258
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 235 GLVELHGQWVRHNEQGRNEPRHSVPGHH 152
GL LH R + GRN+ R SVP HH
Sbjct: 538 GLSRLHPAIRRESAGGRNDGRTSVPLHH 565
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 235 GLVELHGQWVRHNEQGRNEPRHSVPGHH 152
GL LH R + GRN+ R SVP HH
Sbjct: 538 GLSRLHPAIRRESAGGRNDGRTSVPLHH 565
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 235 GLVELHGQWVRHNEQGRNEPRHSVPGHH 152
GL LH R + GRN+ R SVP HH
Sbjct: 538 GLSRLHPAIRRESAGGRNDGRTSVPLHH 565
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = -2
Query: 389 GSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQRGL 249
G GS G GG H +G H GHGRS G G RGL
Sbjct: 57 GGHGGSHGGSHGGH--GSHGGSYGGHS--GHGRSFSTSSGSSGYRGL 99
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = -2
Query: 437 HQARRGSSYHVRHH--HRGSRAGS----CGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKP 276
H+ R GS R H GSR+GS GH G S+ G H GHG S
Sbjct: 225 HRGRSGSPGGRRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRH---GHGGSGHHR 281
Query: 275 RGRWGQRGLXGA 240
GR G G G+
Sbjct: 282 GGRHGGHGRHGS 293
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/56 (37%), Positives = 22/56 (39%)
Frame = -2
Query: 410 HVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQRGLXG 243
H H GSR+GS G R G R G H HG PRG G G G
Sbjct: 334 HGGHGRHGSRSGSPGGRHGHGGRHGPPHCPGRH--GRHGSRSHSPRGH-GHGGRHG 386
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 272 HAASLGYAHGHDTYAH-PKYDYAYSVADPHTGDHKSQHESRDGGAVHGSYS 421
HA G+AH H ++H + D+ + A H G H D G HG+ S
Sbjct: 88 HAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHG-----HSHEDHGHSHGAES 133
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -2
Query: 482 NHDGHQRCSLLYVRNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQ 348
+H H+ S Y +++ G ++H + H G A G+ G+
Sbjct: 6 SHSSHENASGKYGYGDESQHGKNFHQKAEHSGHEAKEKGYSQDGK 50
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 287 GYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVH 409
G++HGHD + H + +++ D + DH H + H
Sbjct: 371 GHSHGHDDHGHDSHGHSH---DHNEHDHGHSHGGNNDNHGH 408
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 287 GYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVH 409
G++HGHD + H + +++ D + DH H + H
Sbjct: 389 GHSHGHDDHGHDSHGHSH---DHNEHDHGHSHGGNNDNHGH 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,303,741
Number of Sequences: 27780
Number of extensions: 279880
Number of successful extensions: 922
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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