Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_C17
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015C4A5B Cluster: hypothetical protein EcE24377A_F...    34   4.2  
UniRef50_Q1FFU9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_Q4XYT3 Cluster: Putative uncharacterized protein; n=2; ...    34   4.2  
UniRef50_P95704 Cluster: Cap5K; n=9; Staphylococcus aureus|Rep: ...    33   9.8  

>UniRef50_UPI00015C4A5B Cluster: hypothetical protein
           EcE24377A_F0081; n=1; Escherichia coli E24377A|Rep:
           hypothetical protein EcE24377A_F0081 - Escherichia coli
           E24377A
          Length = 428

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = +1

Query: 55  LXFNLEYRIVKCIFLNKYLVMYTYYFDDXIFNSKFAI*NILLLYLSKNILSII 213
           L F +    VK + LN  +++Y Y F+D  +++ + I N+ LLYLS   L ++
Sbjct: 106 LFFTVMAFYVKIVPLNPLILLY-YRFNDLFYSTPYPIVNLFLLYLSVAALPLL 157


>UniRef50_Q1FFU9 Cluster: Putative uncharacterized protein; n=1;
           Clostridium phytofermentans ISDg|Rep: Putative
           uncharacterized protein - Clostridium phytofermentans
           ISDg
          Length = 274

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +3

Query: 150 FKVCNLEHFAFIFI*KYIIHYLILTNVIYFSNISTLNLYKNCLVPICV 293
           F++ N+  FA  F  +Y++H+ ++  VI+  N+S  N+  +  V IC+
Sbjct: 158 FRLGNISEFASYFFTQYLLHFALVMLVIFLCNLSR-NMAISMAVGICI 204


>UniRef50_Q4XYT3 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 472

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 162 NLEHFAFIFI*KYIIHYLILTNVIYF-SNISTLNLYKNCLVPICVVNENSLR*VFIF 329
           NL +  FIFI KY   +L   N+IYF S  ++    KN    I ++N   ++ V I+
Sbjct: 32  NLYNQFFIFIFKYYTPFLYTNNIIYFLSTFTSQKKKKNIFTIINIINNEVIKRVKIY 88


>UniRef50_P95704 Cluster: Cap5K; n=9; Staphylococcus aureus|Rep:
           Cap5K - Staphylococcus aureus
          Length = 401

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 25/108 (23%), Positives = 53/108 (49%)
 Frame = +2

Query: 230 YLLFKHLNTKSL*KLFSANMCGE*KLIEIGIYILKPVCSKIANWLVLL**NFIG*LPMCY 409
           +L F +LNT  +  L   N+      + I + +   +  K    L +    F+G L   +
Sbjct: 101 FLYFFNLNTIDIIFLILLNIL---MCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLF 157

Query: 410 IYYSLILSTKIMCFMWTK*IITLYLIINFSKMLIIEYET*INSLIINY 553
           +YY  ++   I+CF+ ++   T+Y ++    + I EY++  N+++ +Y
Sbjct: 158 LYY--LIQNWIVCFITSELFATIYTLVKLRGLTIGEYQSEDNNVVKDY 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,718,492
Number of Sequences: 1657284
Number of extensions: 9320930
Number of successful extensions: 16843
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16833
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)