Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_C13
         (352 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0E7D1 Cluster: Chromosome undetermined scaffold_81, wh...    34   0.58 
UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1; ...    31   4.1  
UniRef50_O77346 Cluster: Putative uncharacterized protein MAL3P4...    31   7.2  
UniRef50_Q8IKX1 Cluster: Putative uncharacterized protein; n=3; ...    30   9.5  
UniRef50_Q8PUT3 Cluster: Conserved protein; n=5; cellular organi...    30   9.5  

>UniRef50_A0E7D1 Cluster: Chromosome undetermined scaffold_81, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_81,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 928

 Score = 34.3 bits (75), Expect = 0.58
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = -3

Query: 233 SHKYEYTNKCFKSK*TILIIFNKLNVHVDRILVSNDSLNIFQCTYKKSKY*RQLL*QF-N 57
           SH Y    K F  + T++   N+L  H D  + SND++   +C +K+ K    LL Q  N
Sbjct: 54  SHYYGEIKKLFSDQPTVIDNVNRLFYH-DARIKSNDTIQQLECLFKQDKQRINLLEQTKN 112

Query: 56  MKYLGTLSSKNKPDTL 9
           +   G L  + + D +
Sbjct: 113 LILKGNLDQQQQLDLI 128


>UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 2111

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -3

Query: 257 NKTYNSKSSHKYEYTNKCFKSK*TILIIFNKLNVHVDRILVSND--SLNIFQCTYKKSKY 84
           N +YN K ++    T     +K      F KLN ++ ++L  N    LN+ +C YK+ KY
Sbjct: 472 NSSYNIKLNYINIQTFLGLLNKTNNSTSFIKLNYYIKKMLCQNKMIKLNLHKCKYKRCKY 531


>UniRef50_O77346 Cluster: Putative uncharacterized protein
           MAL3P4.10; n=3; Plasmodium|Rep: Putative uncharacterized
           protein MAL3P4.10 - Plasmodium falciparum (isolate 3D7)
          Length = 1236

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 99  VGALEDIKRIIRYKNSVNVHI*FVKNNENGLF 194
           V ++E+IK +    N  N+HI F  NN+N  F
Sbjct: 427 VESVENIKNVEYNNNDTNIHIPFNSNNQNNAF 458


>UniRef50_Q8IKX1 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1653

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 9/23 (39%), Positives = 19/23 (82%)
 Frame = +1

Query: 160  FNLLKIMRMVYLLLKHLFVYSYL 228
            FN+LK  R++++ +K++++Y YL
Sbjct: 1478 FNILKKKRLIHIYIKYMYLYEYL 1500


>UniRef50_Q8PUT3 Cluster: Conserved protein; n=5; cellular
           organisms|Rep: Conserved protein - Methanosarcina mazei
           (Methanosarcina frisia)
          Length = 323

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 109 WKILRESLDTRILSTCTFNLLKIMRMVYLLLKHLFVYSYL 228
           ++IL  + DTR+ S+  F +  +M++  LL   +FV SY+
Sbjct: 17  YEILGIASDTRLASSVNFVIYDVMKIFVLLAVMIFVVSYI 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,864,432
Number of Sequences: 1657284
Number of extensions: 3618486
Number of successful extensions: 8489
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8489
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)