Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_C12
         (577 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962...    54   8e-08
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731...    54   8e-08
07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689...    53   2e-07
07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938...    45   5e-05
03_05_0593 - 25959013-25959789                                         33   0.12 

>05_05_0279 -
           23794964-23795111,23795486-23795634,23796120-23796221,
           23796309-23796384,23796578-23796588
          Length = 161

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +1

Query: 175 AKVTWTVLYRRKFKKGQEEEQAKXRTXRTQK-FQRAIVGASLSDIMAKRNMKPEV 336
           AK+TWT +YR++ KK    E  K R   T+K + R+IVGASL  I  KR  KPEV
Sbjct: 49  AKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGASLEVIQKKRAEKPEV 103



 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 36  MKIGLCAYSGYKIYPXHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 173
           +K  LC +SG KIYP  G   ++ D + F F NSKC+     R  P
Sbjct: 3   LKTELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKP 48


>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
            34673237-34675178,34675588-34675658,34676158-34676307,
            34676963-34677038,34677131-34677232,34677707-34677855,
            34678214-34678364
          Length = 1172

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +1

Query: 175  AKVTWTVLYRRKFKKGQEEEQAKXRTXRTQK-FQRAIVGASLSDIMAKRNMKPEV 336
            AK+TWT +YR++ KK    E  K R   T+K + R+IVGA+L  I  KR+ KPEV
Sbjct: 1059 AKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEV 1113



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +3

Query: 48   LCAYSGYKIYPXHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 173
            LC +SG KIYP  G   ++ D + F F NSKC+     R  P
Sbjct: 1017 LCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKP 1058


>07_01_0849 +
           6896930-6896996,6897453-6897474,6897615-6897690,
           6897775-6897876,6898156-6898304,6898637-6898784
          Length = 187

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +1

Query: 175 AKVTWTVLYRRKFKKGQEEEQAKXRTXRTQK-FQRAIVGASLSDIMAKRNMKPEV 336
           AK+TWT +YR++ KK    E  K R   T+K + R+IVGA+L  I  KR  KPEV
Sbjct: 75  AKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEV 129



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +3

Query: 30  VKMKIGLCAYSGYKIYPXHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 173
           +K+   LC +SG KIYP  G   ++ D + F F NSKC+     R  P
Sbjct: 27  LKVWTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKP 74


>07_01_1199 +
           11391638-11391718,11393477-11393590,11393690-11393826,
           11393905-11394064
          Length = 163

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +3

Query: 36  MKIGLCAYSGYKIYPXHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 176
           M++  C +    +YP HG   V+ D K F F  SKC     M+RNPR
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPR 47


>03_05_0593 - 25959013-25959789
          Length = 258

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 296 SEAPTIARWNFWVLXVRFFACSSSWP-FLNLRLYRTVHVTLARIPPHQMG 150
           +E P+ +     +L  + F CSS+ P FL+ R  R  HV +A  PP   G
Sbjct: 46  AEGPSSSMSPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPEPAG 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,201,971
Number of Sequences: 37544
Number of extensions: 199221
Number of successful extensions: 458
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)