Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_C09
(326 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 103 1e-21
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 78 3e-14
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 77 6e-14
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 51 8e-11
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 65 2e-10
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 64 4e-10
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 64 8e-10
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 63 1e-09
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 63 1e-09
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 62 2e-09
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 57 7e-08
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 53 1e-06
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 52 2e-06
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.011
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 34 0.53
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 34 0.70
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 2.1
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 31 3.7
UniRef50_O94911 Cluster: ATP-binding cassette sub-family A membe... 31 4.9
UniRef50_A0AE74 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q6FWH5 Cluster: Similarities with tr|Q07738 Saccharomyc... 31 6.5
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 31 6.5
UniRef50_A6G2B8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_A1G1U7 Cluster: Monovalent cation/proton antiporter, Mn... 30 8.6
UniRef50_Q7F1D3 Cluster: Putative uncharacterized protein OJ1484... 30 8.6
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 103 bits (246), Expect = 1e-21
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 199
GGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 66 GGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 78.2 bits (184), Expect = 3e-14
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 196
GGKS+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG
Sbjct: 68 GGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRG 121
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 77.4 bits (182), Expect = 6e-14
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 196
GGKSTGF LIYD +D KKFEPKHRL R GL + + +RK KE+KNR+KK+RG
Sbjct: 74 GGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKLRG 127
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 51.2 bits (117), Expect(2) = 8e-11
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLAR 118
GGKSTGF LIYD LD AKK+EPK+RL R
Sbjct: 72 GGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 8e-11
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 119 HGLYEKKRPTRKQRKERKNRMKKVRG 196
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 65.3 bits (152), Expect = 2e-10
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 196
GGK+TGF LIYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 73 GGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 64.5 bits (150), Expect = 4e-10
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 199
GG++ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 67 GGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 63.7 bits (148), Expect = 8e-10
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 184
GGK++GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 70 GGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKERKNRMKKVRGT 199
GG+S+GF +IY+ + KKFE ++R R G+ EK T RK RKE KNR KKVRGT
Sbjct: 94 GGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKETKNRRKKVRGT 149
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2
Query: 20 RQTS*GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 196
R T G ++TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 92 RTTFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 199
GG +TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 65 GGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 57.2 bits (132), Expect = 7e-08
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 178
GGKSTGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 66 GGKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 196
GGKSTGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 64 GGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 52.4 bits (120), Expect = 2e-06
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 196
G K + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 50 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 178
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 34.3 bits (75), Expect = 0.53
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -2
Query: 232 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVD 62
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVD 61
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 55 RFDLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 204
+ +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 110 KITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -1
Query: 197 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 81
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 38 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQ 157
G S IYD+ K FEPKH L R+GL +++ +++
Sbjct: 66 GVSEALIHIYDSDVKMKMFEPKHILRRNGLIQEQEAKKQE 105
>UniRef50_O94911 Cluster: ATP-binding cassette sub-family A member 8;
n=13; Catarrhini|Rep: ATP-binding cassette sub-family A
member 8 - Homo sapiens (Human)
Length = 1581
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 240 SHHFLEAAPTLDFLVPRTFFILFLRSLRCL 151
S ++ P L FL+P FI+FL +LRCL
Sbjct: 1151 SEERMDVQPFLVFLIPFLHFIIFLFTLRCL 1180
>UniRef50_A0AE74 Cluster: Putative uncharacterized protein; n=1;
Streptomyces ambofaciens ATCC 23877|Rep: Putative
uncharacterized protein - Streptomyces ambofaciens ATCC
23877
Length = 135
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -1
Query: 167 VLYAVCAWASSSRTGRGGLTCAWARTSWPDRVCRRSKRIQLTCHLTKFVLKPSA 6
V A+ A A+SSR G L+ WA+ SW RR+ R+ T + + P A
Sbjct: 27 VTLAILALAASSRHGMPALSYYWAKMSW-----RRAARVDATSYRRVLLPHPYA 75
>UniRef50_Q6FWH5 Cluster: Similarities with tr|Q07738 Saccharomyces
cerevisiae YDL241w; n=1; Candida glabrata|Rep:
Similarities with tr|Q07738 Saccharomyces cerevisiae
YDL241w - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 113
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 62 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 184
+Y T KK + K++ R K+R RK+RKERK R K
Sbjct: 1 MYSTYSAMKKKKKKNKKKRKE--RKERKERKERKERKERKK 39
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 38 GKSTGFALIYDTLDLAKKFEPKHRLARH------GLYEKKRPTRKQRKERKNRMKK 187
G+S +Y+ +A+ EP + LAR+ L E+ + R +R+E+K R KK
Sbjct: 66 GRSLAEVHVYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121
>UniRef50_A6G2B8 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 489
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 227 WRPHLL*ISWYRGPSSFCSYVLYAVCAWASSSRTGRGGL 111
W P L + + +C+ +L A A+ +RTGRGGL
Sbjct: 138 WMPALSYAGLFTSETPYCAALLLACWRLAALARTGRGGL 176
>UniRef50_A1G1U7 Cluster: Monovalent cation/proton antiporter,
MnhG/PhaG subunit precursor; n=7; Xanthomonadaceae|Rep:
Monovalent cation/proton antiporter, MnhG/PhaG subunit
precursor - Stenotrophomonas maltophilia R551-3
Length = 129
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 61 DLRHTRSGQEVRAQAQVSPPRPVREEE 141
+ R + G E A+ Q+ PP PVREEE
Sbjct: 98 ETRPSLPGNEPAAEEQLPPPEPVREEE 124
>UniRef50_Q7F1D3 Cluster: Putative uncharacterized protein
OJ1484_G09.106; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1484_G09.106 - Oryza sativa subsp. japonica (Rice)
Length = 217
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 216 PTLDFLVPRTFFILFLRSLRCL--RVGLFFSYRPWR 115
P D L+P+ ++F + L CL R+G YRPWR
Sbjct: 96 PWSDGLLPKLLGVIF-KQLNCLVDRIGFTAVYRPWR 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,912,810
Number of Sequences: 1657284
Number of extensions: 4952488
Number of successful extensions: 17251
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17133
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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