Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_C09
         (326 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   0.62 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   0.62 
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   0.62 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   7.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   7.6  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 0.62
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 65  YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 187
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 233 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 280


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 0.62
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 259 IHLYLAFTSLLGGRTYFRFLGTADLLHSVLTFFTLF 152
           IHL++    L+G + +        L HSV  F T+F
Sbjct: 778 IHLFVKCVFLMGYQIFDWVQKEQSLAHSVGVFLTIF 813


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.4 bits (48), Expect = 0.62
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 65  YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 187
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 15  YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 62


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -3

Query: 138 FFSYRPW 118
           F+ YRPW
Sbjct: 490 FYDYRPW 496


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 83  PDRVCRRSKRIQLTCHLTKFVLKPSAG 3
           PDR+ +  +        T F L+P+AG
Sbjct: 296 PDRIPQLEEMSNFLKRHTGFSLRPAAG 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,052
Number of Sequences: 336
Number of extensions: 1278
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)