Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_C09
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 89 9e-19
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 40 4e-04
AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical... 28 1.4
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 28 1.4
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 28 1.4
Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 3.2
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 3.2
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 3.2
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 3.2
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 27 4.2
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 26 5.6
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 26 5.6
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 26 5.6
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 26 5.6
Z68751-5|CAA92975.1| 468|Caenorhabditis elegans Hypothetical pr... 25 9.7
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 25 9.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 9.7
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 88.6 bits (210), Expect = 9e-19
Identities = 42/56 (75%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = +2
Query: 35 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEK-KRPTRKQRKERKNRMKKVRGT 199
GGKS GFAL+YDT+D AKKFEPK+RL R GL K ++P RKQRKERKNR KKVRGT
Sbjct: 66 GGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQRKERKNRQKKVRGT 121
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 39.9 bits (89), Expect = 4e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 50 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 178
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical
protein Y105E8A.28 protein.
Length = 210
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 70 HTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGP 192
H R+ + R + V PP+ E E A A EQN GP
Sbjct: 26 HLRNEELHRFRQAVPPPQQAEEAEEEADVAENVVEQNRLGP 66
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 62 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 187
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 17 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 57
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 62 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 187
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 64 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 104
>Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical
protein F57G8.3 protein.
Length = 331
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -2
Query: 259 IHLYLAFTSLLGGRTYFRFLGTADL-LHSV---LTFFTLFARGPLLLVQAVAG*PVLGLE 92
+HL+ A+ + + + T+ L LH V + FFT F P+L++ AG P+ L
Sbjct: 29 VHLFGAYIIIFKTPDKMKSVRTSMLSLHLVGAFVDFFTSFLTAPVLILPVCAGYPLGVLG 88
Query: 91 LLG 83
+LG
Sbjct: 89 MLG 91
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 820 ERKREKKKERDERKKEKEKVR 840
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 1111 ERKREKKKERDERKKEKEKVR 1131
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 820 ERKREKKKERDERKKEKEKVR 840
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 1111 ERKREKKKERDERKKEKEKVR 1131
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 131 EKKRPTRKQRKERKNRMKKVR 193
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 185 SSFCSYVLYAVCAWASSSRTGRGGLTC 105
+SFC+Y L+ CA + + GG C
Sbjct: 99 ASFCNYPLFVFCAGSIGLGSWMGGCVC 125
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 86 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 193
KK E + A EKK R++RKE+++ +K R
Sbjct: 470 KKHETEEERAERKRKEKKEKERQERKEKEHDEQKKR 505
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 1 RPADGFKTNFVRWQVNWIR 57
RPAD K NF WQ + R
Sbjct: 487 RPADSVKVNFENWQTSCTR 505
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 80 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 193
L K+ + + +L + EKK+ + ++KERK K+ R
Sbjct: 125 LEKQRKKEKKLKKKAKKEKKKAKKLEKKERKKERKEKR 162
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 67 RHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 204
RH R +E+R Q Q R ++EE Q +Q E+ + +E
Sbjct: 544 RHDREREEMRLQKQKDEERRKKDEEERIQKENDEKKQKEDEAKMEE 589
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 67 RHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 204
RH R +E+R Q Q R ++EE Q +Q E+ + +E
Sbjct: 558 RHDREREEMRLQKQKDEERRKKDEEERIQKENDEKKQKEDEAKMEE 603
>Z68751-5|CAA92975.1| 468|Caenorhabditis elegans Hypothetical
protein T05E11.5 protein.
Length = 468
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 237 HHFLEAAPTLDFLVPRTFFILFL 169
HHF A P L +LVP F+ L
Sbjct: 410 HHFKAAQPALLYLVPCCLFVPLL 432
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 83 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 187
AKK E K EKK ++++KE KN K
Sbjct: 168 AKKEEKKEEKKEEKKEEKKEEKKEEKKEEKNDENK 202
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 17 SRQTS*GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRM 181
S TS S A T +KK + K R +HG + R + ER NR+
Sbjct: 725 SASTSESSSSAPSAEQVSTPKKSKKNKEKRRDQQHGERSSRETERLENNERPNRI 779
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,270,214
Number of Sequences: 27780
Number of extensions: 114064
Number of successful extensions: 429
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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