Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_C08
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    27   0.15 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    27   0.15 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.7  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   7.7  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   7.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
 Frame = -1

Query: 602 SNLASCFATTVLSTFNESSIPVTANY----SVIQPRAIYIPHTIFGIFPRIVFYKTK--- 444
           S+    + T+ +S FNESS  V  NY    S++    I     I  +   IV +KTK   
Sbjct: 41  SSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVMVPIVIFKTKDMR 100

Query: 443 -STRCFLV 423
            ST  FLV
Sbjct: 101 NSTNIFLV 108


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
 Frame = -1

Query: 602 SNLASCFATTVLSTFNESSIPVTANY----SVIQPRAIYIPHTIFGIFPRIVFYKTK--- 444
           S+    + T+ +S FNESS  V  NY    S++    I     I  +   IV +KTK   
Sbjct: 41  SSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVMVPIVIFKTKDMR 100

Query: 443 -STRCFLV 423
            ST  FLV
Sbjct: 101 NSTNIFLV 108


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 225 DSSDFITNYHWY 190
           D SDFITN  WY
Sbjct: 167 DLSDFITNGEWY 178


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 225 DSSDFITNYHWY 190
           D SDFITN  WY
Sbjct: 167 DLSDFITNGEWY 178


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 225 DSSDFITNYHWY 190
           D SDFITN  WY
Sbjct: 167 DLSDFITNGEWY 178


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 225 DSSDFITNYHWY 190
           D SDFITN  WY
Sbjct: 167 DLSDFITNGEWY 178


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 225 DSSDFITNYHWY 190
           D SDFITN  WY
Sbjct: 167 DLSDFITNGEWY 178


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 495 YINGTRLDDRIIRCDWDAGFIEG 563
           Y+    +D RII CD    FI G
Sbjct: 252 YVTRHLIDGRIIGCDQRISFIAG 274


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = -1

Query: 560 FNESSIPVTANYSVIQPRAIYIPHTI 483
           F   S+P    Y    P+ +Y P  +
Sbjct: 254 FTAESLPDLTKYGAYSPKKVYAPEEV 279


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 707 NCNTLLTF*GIWVYFLCYYFSITATPTV 624
           N   +  F  +W  F   Y+ +T TP +
Sbjct: 143 NGTEVAKFKNMWTRFQLKYYQVTGTPII 170


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 707 NCNTLLTF*GIWVYFLCYYFSITATPTV 624
           N   +  F  +W  F   Y+ +T TP +
Sbjct: 143 NGTEVAKFKNMWTRFQLKYYQVTGTPII 170


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 460 YSTKQNPQGVFLYLSSPIITLLISPHR 380
           Y+   N    F ++ SPI    + PHR
Sbjct: 78  YTKSANTIRSFTHVESPIDEKFVHPHR 104


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +2

Query: 422 IQENTLWILFCRILCAGRCRKLYEVYKWHEAG*QNNSL*LGCWIH 556
           + + + +IL   I+ A  CR  +   +W  AG  +  +    +IH
Sbjct: 13  LDKKSKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIH 57


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +2

Query: 422 IQENTLWILFCRILCAGRCRKLYEVYKWHEAG*QNNSL*LGCWIH 556
           + + + +IL   I+ A  CR  +   +W  AG  +  +    +IH
Sbjct: 13  LDKKSKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIH 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,451
Number of Sequences: 336
Number of extensions: 4141
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)