Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_C08
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 183 1e-46
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 55 5e-08
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 55 5e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 48 5e-06
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 48 5e-06
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 48 5e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 43 2e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 43 2e-04
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 43 2e-04
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 0.001
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 41 0.001
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.001
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 0.001
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 39 0.003
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.003
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.003
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 39 0.004
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 38 0.007
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 38 0.007
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 38 0.007
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 38 0.007
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 38 0.007
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 38 0.010
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.013
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.022
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 36 0.022
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.029
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.029
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.029
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.029
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.029
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 36 0.029
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.21
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 32 0.36
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 31 0.63
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 31 0.84
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 1.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.1
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 30 1.9
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 30 1.9
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 30 1.9
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 30 1.9
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 30 1.9
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 30 1.9
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 30 1.9
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 30 1.9
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 30 1.9
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 29 2.6
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 29 3.4
Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 29 4.5
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 4.5
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 4.5
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 4.5
AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 29 4.5
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 28 5.9
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 28 7.8
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 28 7.8
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 183 bits (446), Expect = 1e-46
Identities = 82/133 (61%), Positives = 99/133 (74%)
Frame = +3
Query: 267 REQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 446
R QG+ +QE L+ S TLY+GNLS+YT E+Q+YEL+ R GD+RRVIMGLD++KKTPCGF
Sbjct: 21 RYQGTVRDQETALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGF 80
Query: 447 CFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVXXXXXXXXX 626
CFVEYY REDAE ++ I+ TR+DDR+IR DWDAGFIEGRQYGRGK GGQV
Sbjct: 81 CFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFIEGRQYGRGKHGGQVRDEYRKDYD 140
Query: 627 XXXXXXXKIIAQK 665
+ IAQK
Sbjct: 141 PERGGYNRAIAQK 153
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/90 (28%), Positives = 53/90 (58%)
Frame = +3
Query: 306 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 485
++ ++++GN+S+ +E+ I ++S+ G++ + M D+ P G+ F+E+ + AE
Sbjct: 15 RSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEV 74
Query: 486 CMRYINGTRLDDRIIRCDWDAGFIEGRQYG 575
+R +NG L RI+R D AG + ++G
Sbjct: 75 AIRNLNGYELSGRILRVDSAAGGMNMEEFG 104
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
++L I NLS+ TT + + R GDI V + DKY + GF FV +Y R DAE+ +
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 495 YINGTRLDDRIIR 533
+G +D R +R
Sbjct: 79 RTDGKLVDGRELR 91
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
++L I NLS+ TT + + R GDI V + DKY + GF FV +Y R DAE+ +
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 495 YINGTRLDDRIIR 533
+G +D R +R
Sbjct: 79 RTDGKLVDGRELR 91
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
++Y+GN F TTEE++ +S G I V + D+ P GF F+E+ A+ +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 498 INGTRLDDRIIR 533
+NG + R +R
Sbjct: 66 MNGAEFNGRPLR 77
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/89 (28%), Positives = 48/89 (53%)
Frame = +3
Query: 273 QGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCF 452
Q + +EK + ++Y+GN+ + T E+I + + CG + RV + D++ P GF +
Sbjct: 64 QSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAY 123
Query: 453 VEYYAREDAENCMRYINGTRLDDRIIRCD 539
VE+ +E +N + + + L R I+ D
Sbjct: 124 VEFTEKEGMQNALA-MTDSLLRGRQIKVD 151
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +3
Query: 288 EQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYA 467
E++K + A S ++IGN+ F +T E++ E + CG I R + DK+ K F ++E+
Sbjct: 53 EEQKAIDAKS-VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDD 111
Query: 468 REDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYG-RGKTGG 593
EN + +NG+ R I I G +G RG + G
Sbjct: 112 SSSIENAL-VMNGSLFRSRPIVVTAKRTNIPGMGHGVRGSSRG 153
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
++Y+GN F TTE+ + +S+ G++ V + D+ P GF FVE+ A+ +
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 498 INGTRLDDRIIR 533
NG + R +R
Sbjct: 65 FNGVDFNGRALR 76
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +3
Query: 288 EQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYA 467
E++K + A S ++IGN+ F +T E+I E + CG I + + DK+ K F ++E+
Sbjct: 47 EEQKAIDAKS-VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDD 105
Query: 468 REDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYG-RGKTGG 593
EN + +NG+ R I I G +G RG + G
Sbjct: 106 SSSIENAL-VMNGSLFRSRPIVVTAKRTNIPGMGHGVRGSSRG 147
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+T + NL E+++ +L+ + G + R+ + DK P GF FV + +R+DA +
Sbjct: 176 NTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
Query: 495 YINGTRLDDRIIRCDW 542
+N R+ +++ +W
Sbjct: 236 ELNDIRMYHMVLKVEW 251
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
++Y+GN+ + TEE+I ++ G + V + D+ P GF FVE+ A+ +
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 498 INGTRLDDRIIRCDW 542
+NG + R +R ++
Sbjct: 67 LNGVAFNGRNLRVNY 81
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+Y+G L T +++ E++ R G IR+V + + P GF FVEY DAE+ +R +
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 501 NGTRLDDRIIRCDWDAGFIEGRQYGRGKTGG 593
+G+R+ R + G R+ G G+ GG
Sbjct: 60 DGSRICGVRARVELSTG---QRRGGGGRGGG 87
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+Y+G L T +++ E++ R G IR+V + + P GF FVEY DAE+ +R +
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 501 NGTRLDDRIIRCDWDAGFIEGRQYGRGKTGG 593
+G+R+ R + G R+ G G+ GG
Sbjct: 60 DGSRICGVRARVELSTG---QRRGGGGRGGG 87
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+Y+G L T +++ E++ R G IR+V + + P GF FVEY DAE+ +R +
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 501 NGTRLDDRIIRCDWDAGFIEGRQYGRGKTGG 593
+G+R+ R + G R+ G G+ GG
Sbjct: 60 DGSRICGVRARVELSTG---QRRGGGGRGGG 87
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = +3
Query: 267 REQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELY-SRCGD------IRRVIMGLDKY 425
+++ S+ + EK +++ STL++ NL+F TT+ + L+ R GD I + + +
Sbjct: 625 KKKSSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPT 684
Query: 426 KKTPCGFCFVEYYAREDAENCMRYINGTRLD 518
K GF FV++Y DA+ ++ + G LD
Sbjct: 685 KPLSMGFGFVQFYTAFDAKTALKDMQGELLD 715
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/84 (26%), Positives = 45/84 (53%)
Frame = +3
Query: 255 TLRTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKT 434
+L +R++ + +EK+L+ + L++ NL + T E+ + L+ + G++ V + +DK
Sbjct: 260 SLESRDKEEETVREKILE-TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGA 318
Query: 435 PCGFCFVEYYAREDAENCMRYING 506
GF VE+ E A ++G
Sbjct: 319 CKGFAIVEFVFPEAAVAAYSALDG 342
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 306 KASST-LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAE 482
KA +T +Y+GN+S TT+ + +L+S GDI V + KT + FV Y +E A
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEV-----RIFKTQ-RYAFVRYEKKECAT 286
Query: 483 NCMRYINGTRLDDRIIRCDW 542
+ +NG + +RC W
Sbjct: 287 KAIMEMNGKEMAGNQVRCSW 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/76 (23%), Positives = 41/76 (53%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+++G+LS + E + +++ G++ + D + G+ FV + +++AEN + +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 501 NGTRLDDRIIRCDWDA 548
NG + R +R +W A
Sbjct: 197 NGKWIGKRAVRTNWAA 212
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 282 RSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLD-KYKKTPCGFCFVE 458
R EQ KL + L I NL F T +E + L S G +++ K KT GF F++
Sbjct: 86 RFEQAKLKEWR--LIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQ 143
Query: 459 YYAREDAENCMRYINGTRLDDRIIRCDW 542
+ + DAE + N ++ R + DW
Sbjct: 144 FVEKADAEKGREFFNTNKVLGRSVAADW 171
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+T+Y+G L +E ++EL + G + V M D+ GF FVE+ EDA+ ++
Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
Query: 495 YINGTRLDDRIIR 533
+N +L + I+
Sbjct: 73 ILNMIKLYGKPIK 85
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 285 SEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGL-DKYKKTPCGFCFVEY 461
S EK + + +++GNL E+ +Y+ +S G I +V + D T GF F+ +
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 462 YAREDAENCMRYINGTRLDDRII 530
+ E ++ + +NG L +R I
Sbjct: 150 ASFEASDTALEAMNGQFLCNRAI 172
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/83 (24%), Positives = 45/83 (54%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+++ N+ TE+ +++ +S G I+ + + LD+ G+ VEY +++A +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 501 NGTRLDDRIIRCDWDAGFIEGRQ 569
N T L + ++ DW F++G++
Sbjct: 117 NDTDLLGQNVKVDW--CFVKGKK 137
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+++G+LS +++ E + GD+ + D G+ FV Y RE+AE + +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 501 NGTRLDDRIIRCDW 542
NG L R IR +W
Sbjct: 84 NGQWLGRRTIRTNW 97
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+++G+LS +++ E + GD+ + D G+ FV Y RE+AE + +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 501 NGTRLDDRIIRCDW 542
NG L R IR +W
Sbjct: 94 NGQWLGRRTIRTNW 107
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+++G+LS +++ E + GD+ + D G+ FV Y RE+AE + +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 501 NGTRLDDRIIRCDW 542
NG L R IR +W
Sbjct: 197 NGQWLGRRTIRTNW 210
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
TLY+GNL TE+ I L+++ G + + + D P + FVE+ A ++
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG-SNDP--YAFVEFSDHGQASQALQT 103
Query: 498 INGTRLDDRIIRCDW 542
+N L DR ++ +W
Sbjct: 104 MNKRLLLDREMKVNW 118
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+++G+LS +++ E + GD+ + D G+ FV Y RE+AE + +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 501 NGTRLDDRIIRCDW 542
NG L R IR +W
Sbjct: 165 NGQWLGRRTIRTNW 178
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYK 428
TLY+GNL TE+ I L+++ G + + + D+ K
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+T+Y+G L +E ++EL + G + V M D+ GF FVE+ EDA+ ++
Sbjct: 23 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 82
Query: 495 YINGTRLDDRIIR 533
+N +L + I+
Sbjct: 83 ILNMIKLYGKPIK 95
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 285 SEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGL-DKYKKTPCGFCFVEY 461
S EK + + +++GNL E+ +Y+ +S G I +V + D T GF F+ +
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 462 YAREDAENCMRYINGTRLDDRII 530
+ E ++ + +NG L +R I
Sbjct: 160 ASFEASDTALEAMNGQFLCNRAI 182
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +3
Query: 288 EQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYA 467
EQEK + ++Y+GN+ + +T +I E ++ CG + RV + DK+ F FVE+
Sbjct: 39 EQEKT--DARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQK 96
Query: 468 REDAENCMRYINGTRLDDRII 530
E + + ++GT +R I
Sbjct: 97 LESVQLAL-VLSGTMFRNRKI 116
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +3
Query: 312 SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 491
++++Y+GN++ E++I + R G I V +K G+ FV++ +E A +
Sbjct: 255 NTSVYVGNIA-NLGEDEIRRAFDRFGPINEV----RTFKIQ--GYAFVKFETKESAARAI 307
Query: 492 RYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGG 593
+N + +I+RC W G+ RG GG
Sbjct: 308 VQMNNADIGGQIVRCSWGKSGDSGKPSERGSGGG 341
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+++G+L ++ E + + G++ + D G+ FV Y REDAE + +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 501 NGTRLDDRIIRCDW 542
NG L R IR +W
Sbjct: 194 NGAWLGRRTIRTNW 207
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
++I NL+F +++YE++ G I + +DK K+ G C ++Y +A + +
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSK-GVCVIQYTHPIEAVQAVSML 248
Query: 501 NGTRLDDR 524
NG RL DR
Sbjct: 249 NGQRLFDR 256
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +3
Query: 312 SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 491
S L + NLS YTTE+ + +++ G+I + + D+ GF F+ + EDA
Sbjct: 75 SKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAAR 134
Query: 492 RYINGTRLDDRIIRCDW 542
+ T LD IR D+
Sbjct: 135 DKLCNTDLDGHKIRVDF 151
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +3
Query: 306 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 485
++ + L I L T+E++ L++ G+I + DK G+ FV Y EDA
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 486 CMRYINGTRLDDRIIRCDW 542
+ NG RL ++ I+ +
Sbjct: 99 AVSSFNGLRLQNKTIKVSY 117
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 306 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 485
K S+ +YIG LS+ +E + ++S+ G++ + + DK GF F+ Y +
Sbjct: 35 KDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTIL 94
Query: 486 CMRYINGTRLDDRIIRCD 539
+ NG L R+IR D
Sbjct: 95 AVDNFNGISLHKRMIRVD 112
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
++LYIG+L +E ++E +S G + + + D + G+ +V + DAE +
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 116
Query: 495 YINGTRLDDRIIRCDWDAGFIEGRQYGRG 581
+N + R +R W R+ G G
Sbjct: 117 TMNFEVIHGRPMRIMWSQRDPAARRAGNG 145
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
++LYIG+L +E ++E +S G + + + D + G+ +V + DAE +
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 116
Query: 495 YINGTRLDDRIIRCDWDAGFIEGRQYGRG 581
+N + R +R W R+ G G
Sbjct: 117 TMNFEVIHGRPMRIMWSQRDPAARRAGNG 145
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 261 RTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKK-TP 437
R R RS + + + I NLS + + E++S G I+ V + D++
Sbjct: 115 RRRASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVH 174
Query: 438 CGFCFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAG 551
G+ +VEY EDAE +++++G ++D + + G
Sbjct: 175 RGYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIG 212
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+Y+GNL E+++ +++ + G I+ V + K + P F FVE+ DAE+ +R
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPA-FAFVEFEDHRDAEDAVRAR 66
Query: 501 NGTRLDDRIIRCDWDAG 551
+G D R IR ++ G
Sbjct: 67 DGYEFDGRRIRVEFTRG 83
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
+Y+GNL E+++ +++ + G I+ V + K + P F FVE+ DAE+ +R
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPA-FAFVEFEDHRDAEDAVRAR 66
Query: 501 NGTRLDDRIIRCDWDAG 551
+G D R IR ++ G
Sbjct: 67 DGYEFDGRRIRVEFTRG 83
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 309 ASSTLYIGNLSFYTTEEQIYELYSRCGD----IRRVIMGLDKYKKTPCGFCFVEYYARED 476
A TL+IG++ TEE + ++++ CG ++RV + D+ K G+CF+E+ ++
Sbjct: 66 AQRTLWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVK-DELK----GYCFIEFITFDE 120
Query: 477 AENCMRYINGTRL 515
A + +NG R+
Sbjct: 121 ARQTLYDLNGNRI 133
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = +3
Query: 300 LLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
++ +++ ++IG L Y TE+Q+ EL G ++ + +D + G+ F EY
Sbjct: 286 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK-GYAFAEYLDPTLT 344
Query: 480 ENCMRYINGTRLDDR 524
+ + +NG +L D+
Sbjct: 345 DQAIAGLNGMQLGDK 359
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = +3
Query: 300 LLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
++ +++ ++IG L Y TE+Q+ EL G ++ + +D + G+ F EY
Sbjct: 286 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK-GYAFAEYLDPTLT 344
Query: 480 ENCMRYINGTRLDDR 524
+ + +NG +L D+
Sbjct: 345 DQAIAGLNGMQLGDK 359
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = +3
Query: 300 LLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
++ +++ ++IG L Y TE+Q+ EL G ++ + +D + G+ F EY
Sbjct: 261 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK-GYAFAEYLDPTLT 319
Query: 480 ENCMRYINGTRLDDR 524
+ + +NG +L D+
Sbjct: 320 DQAIAGLNGMQLGDK 334
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = +3
Query: 300 LLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
++ +++ ++IG L Y TE+Q+ EL G ++ + +D + G+ F EY
Sbjct: 264 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK-GYAFAEYLDPTLT 322
Query: 480 ENCMRYINGTRLDDR 524
+ + +NG +L D+
Sbjct: 323 DQAIAGLNGMQLGDK 337
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
LYI NL + T E++YE++ + G +R++ +G + G FV Y DA+ ++
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETR---GTAFVVYEDIFDAKTACEHL 77
Query: 501 NGTRLDDRII 530
+G + +R +
Sbjct: 78 SGYNVSNRYL 87
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +3
Query: 249 LKTLRTREQGSRSEQ--EKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDK 422
L+ + +++ + +Q + L S +Y+G++SF E+ + + G I+ + M D
Sbjct: 78 LRQQKQQQENQQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDP 137
Query: 423 YKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIR 533
F FVEY E A +NG L R ++
Sbjct: 138 ATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLK 174
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +3
Query: 249 LKTLRTREQGSRSEQ--EKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDK 422
L+ + +++ + +Q + L S +Y+G++SF E+ + + G I+ + M D
Sbjct: 78 LRQQKQQQENQQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDP 137
Query: 423 YKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIR 533
F FVEY E A +NG L R ++
Sbjct: 138 ATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLK 174
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +3
Query: 249 LKTLRTREQGSRSEQ--EKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDK 422
L+ + +++ + +Q + L S +Y+G++SF E+ + + G I+ + M D
Sbjct: 78 LRQQKQQQENQQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDP 137
Query: 423 YKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIR 533
F FVEY E A +NG L R ++
Sbjct: 138 ATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLK 174
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+++G L+ TT++ + E YS+ G+I +I+ D K GF FV + + + + M+
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 267 REQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 446
R+ +RSE K LY+ + TE+ + E +++ G + + + LDK + P GF
Sbjct: 101 RDDKNRSESNVSTKR---LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGF 157
Query: 447 CFVEYYAREDAENCM----RYINGTRLDDR 524
FV + + + C+ +NG R D R
Sbjct: 158 GFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 187
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 267 REQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 446
R+ +RSE K LY+ + TE+ + E +++ G + + + LDK + P GF
Sbjct: 63 RDDKNRSESNVSTKR---LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGF 119
Query: 447 CFVEYYAREDAENCM----RYINGTRLDDR 524
FV + + + C+ +NG R D R
Sbjct: 120 GFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 149
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 267 REQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 446
R+ +RSE K LY+ + TE+ + E +++ G + + + LDK + P GF
Sbjct: 63 RDDKNRSESNVSTKR---LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGF 119
Query: 447 CFVEYYAREDAENCM----RYINGTRLDDR 524
FV + + + C+ +NG R D R
Sbjct: 120 GFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 149
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+++G L+ TT++ + E YS+ G+I +I+ D K GF FV + + + + M+
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 267 REQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 446
R+ +RSE K LY+ + TE+ + E +++ G + + + LDK + P GF
Sbjct: 101 RDDKNRSESNVSTKR---LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGF 157
Query: 447 CFVEYYAREDAENCM----RYINGTRLDDR 524
FV + + + C+ +NG R D R
Sbjct: 158 GFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 187
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+++G L+ TT++ + E YS+ G+I +I+ D K GF FV + + + + M+
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 267 REQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 446
R+ +RSE K LY+ + TE+ + E +++ G + + + LDK + P GF
Sbjct: 101 RDDKNRSESNVSTKR---LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGF 157
Query: 447 CFVEYYAREDAENCM----RYINGTRLDDR 524
FV + + + C+ +NG R D R
Sbjct: 158 GFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 187
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +3
Query: 258 LRTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTP 437
LR ++ G Q L+IG LS TT+EQ+ +S+ G + I+ D K
Sbjct: 50 LRFQQMGMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHS 109
Query: 438 CGFCFVEYYAREDAENCM 491
GF FV + + AE+ M
Sbjct: 110 RGFGFVTFASIFSAESAM 127
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 37.1 bits (82), Expect = 0.013
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 23/116 (19%)
Frame = +3
Query: 261 RTREQGSRSEQEKLLKASS-----TLYIGNLSFYTTEEQIYELYSRCGDIRRVIM----- 410
RT+++ +R+ Q+ +AS+ T+++GN+ E+ + ++S G I V M
Sbjct: 120 RTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLP 179
Query: 411 -------------GLDKYKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCD 539
G K++ F +V++ A E E ++Y NGT+LDD +IR D
Sbjct: 180 ANEKLTKRVTHLTGKLNDKQSSLTF-YVKFGAEESVEKALKY-NGTKLDDHVIRVD 233
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYS-RCGDIRRVIMGLDKYKKTPCGFCFVEY 461
+++GNL F TE+ + +S + G + V + DK GF FV +
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
TLY+G + TE+ + + GD+ + + +D GF FVE+ EDA +
Sbjct: 12 TLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 498 INGTRLDDRIIRCDW 542
+N + L + IR ++
Sbjct: 72 MNESELFGKTIRVNF 86
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+++G L ++T+++ ++E + + GDI ++ D+ + G+ FV R AE +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/86 (22%), Positives = 39/86 (45%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+ L++ L+ TT+E + ++SR G I + D+ + F+E+ + E
Sbjct: 241 NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFF 300
Query: 495 YINGTRLDDRIIRCDWDAGFIEGRQY 572
++ +DDR I D+ + +Y
Sbjct: 301 KMDNVLIDDRRIHVDFSQSVSQNYKY 326
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/86 (22%), Positives = 39/86 (45%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+ L++ L+ TT+E + ++SR G I + D+ + F+E+ + E
Sbjct: 241 NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFF 300
Query: 495 YINGTRLDDRIIRCDWDAGFIEGRQY 572
++ +DDR I D+ + +Y
Sbjct: 301 KMDNVLIDDRRIHVDFSQSVSQNYKY 326
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/86 (22%), Positives = 39/86 (45%)
Frame = +3
Query: 315 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 494
+ L++ L+ TT+E + ++SR G I + D+ + F+E+ + E
Sbjct: 172 NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFF 231
Query: 495 YINGTRLDDRIIRCDWDAGFIEGRQY 572
++ +DDR I D+ + +Y
Sbjct: 232 KMDNVLIDDRRIHVDFSQSVSQNYKY 257
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.029
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +3
Query: 312 SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 491
++ +YIG L+ +E+ I + G IR V++ GF FVE+ + DAE+ +
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
Query: 492 RYINGTRLDDRIIRCDWD---AGFIEGRQYGRGKTGG 593
+NG L + D+ G + +G G GG
Sbjct: 54 HDLNGKELGGERVILDYSKPRGGGGDRGGFGGGGRGG 90
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.029
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +3
Query: 312 SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 491
++ +YIG L+ +E+ I + G IR V++ GF FVE+ + DAE+ +
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
Query: 492 RYINGTRLDDRIIRCDWD---AGFIEGRQYGRGKTGG 593
+NG L + D+ G + +G G GG
Sbjct: 54 HDLNGKELGGERVILDYSKPRGGGGDRGGFGGGGRGG 90
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.9 bits (79), Expect = 0.029
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +3
Query: 312 SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 491
++ +YIG L+ +E+ I + G IR V++ GF FVE+ + DAE+ +
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
Query: 492 RYINGTRLDDRIIRCDWD---AGFIEGRQYGRGKTGG 593
+NG L + D+ G + +G G GG
Sbjct: 54 HDLNGKELGGERVILDYSKPRGGGGDRGGFGGGGRGG 90
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +3
Query: 234 VNFRCLKTLRTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMG 413
+NF L R S+ + + ++I NL + IY+ +S G+I +
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVA 152
Query: 414 LDKYKKTPCGFCFVEYYAREDAENCMRYINGTRL 515
+D+ + G+ FV + E A+N ++ +NG L
Sbjct: 153 IDEDGFSK-GYGFVHFETEEAAQNAIQKVNGMLL 185
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +3
Query: 234 VNFRCLKTLRTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMG 413
+NF L R S+ + + ++I NL + IY+ +S G+I +
Sbjct: 30 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVA 89
Query: 414 LDKYKKTPCGFCFVEYYAREDAENCMRYINGTRL 515
+D+ + G+ FV + E A+N ++ +NG L
Sbjct: 90 IDEDGFSK-GYGFVHFETEEAAQNAIQKVNGMLL 122
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +3
Query: 234 VNFRCLKTLRTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMG 413
+NF L R S+ + + ++I NL + IY+ +S G+I +
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVA 152
Query: 414 LDKYKKTPCGFCFVEYYAREDAENCMRYINGTRL 515
+D+ + G+ FV + E A+N ++ +NG L
Sbjct: 153 IDEDGFSK-GYGFVHFETEEAAQNAIQKVNGMLL 185
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 491
L+IG LS TT+EQ+ +S+ G + I+ D K GF FV + + AE+ M
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 491
L+IG LS TT+EQ+ +S+ G + I+ D K GF FV + + AE+ M
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Frame = +3
Query: 303 LKASSTLYIGNLSFYTTEEQIYELYSRCGDIR------RVIMGLDKYKKTPCGFCFVEYY 464
++ T+++ +S E I +++S CGDI R+ + D+ P G C + +
Sbjct: 197 VELKETVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFV 256
Query: 465 AREDAENCMRYING-------TRLDDRIIRCDWDAGFIEGRQYGRGKTGG 593
A+ + NG + + + + DAG G + GRG GG
Sbjct: 257 DASAAQQAITMYNGQPFPGGSSPMSISLAKFRADAGGERGGRGGRGGFGG 306
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +3
Query: 294 EKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYARE 473
E + LYI N+ TEE++ EL+ + LD+ KK + F+ + R+
Sbjct: 370 EDTMSKVKVLYIRNIKEAVTEEKLNELF-------KEYASLDRVKKVK-DYAFIHFNERD 421
Query: 474 DAENCMRYINGTRLDDRII 530
D M NG L+ ++
Sbjct: 422 DCLKAMEEWNGKELEGTVV 440
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQ-------IYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+Y+GN+ F TE++ IY+ + I + K+ P GF FV + A
Sbjct: 19 VYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPP-GFAFVTFKRTVHA 77
Query: 480 ENCMRYINGTRLDD 521
+ ++Y+NG ++ D
Sbjct: 78 FDAVKYLNGKKICD 91
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
T+Y+ N S EE + EL+ + G + +VI L + + F VE+ +
Sbjct: 14 TIYVANFSEEVDEELLEELFIQAGPVVKVI--LRDVRDSNAKFALVEFEDELSVLFAIEL 71
Query: 498 INGTRLDDRIIRCDWDAGFIEGRQYGRGK 584
+NG RL ++ ++ G + Y R K
Sbjct: 72 MNGVRLFNQELQVKPRNGTNQEELYKRKK 100
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +3
Query: 264 TREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCG 443
T +G + + +S+ LYI L T ++ + E+ S+ G+I +DK G
Sbjct: 64 TAPRGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 123
Query: 444 FCFVEYYAREDAENCMRYIN 503
+ FV++ + + A + +N
Sbjct: 124 YGFVDFESPQAAAAAVDGLN 143
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
L++GNL E ++ EL+S GDI + + GF F+ R AE+ I
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 501 NGTRLDDRIIR 533
+G + R +R
Sbjct: 171 DGRIIHGRQVR 181
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
L++GNL E ++ EL+S GDI + + GF F+ R AE+ I
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 501 NGTRLDDRIIR 533
+G + R +R
Sbjct: 171 DGRIIHGRQVR 181
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 417 DKYKKTPCGFCFVEYYAREDAENCMRYI 500
+K KK+P CF EY R+D YI
Sbjct: 277 EKIKKSPLTICFPEYSGRQDYHEASAYI 304
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = -3
Query: 552 IQHPSHSELFCHPASCHLYTSYNFRHLPAHSILQNKIHKVFSCICLVPLLLFLYRRIVNT 373
I + HS+ A +++ + +HLP L N + + + + L + YR +V
Sbjct: 528 ISNCRHSDAIDFAAMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVEN 587
Query: 372 VHKFVLLLCKM 340
K++L+ C M
Sbjct: 588 KSKYILIACHM 598
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = -3
Query: 552 IQHPSHSELFCHPASCHLYTSYNFRHLPAHSILQNKIHKVFSCICLVPLLLFLYRRIVNT 373
I + HS+ A +++ + +HLP L N + + + + L + YR +V
Sbjct: 528 ISNCRHSDAIDFAAMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVEN 587
Query: 372 VHKFVLLLCKM 340
K++L+ C M
Sbjct: 588 KSKYILIACHM 598
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+++G + E L+ + G + + DK + G CFV +Y R+DA
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+++G + E L+ + G + + DK + G CFV +Y R+DA
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 417 DKYKKTPCGFCFVEYYAREDAENCMRYI 500
+K KK+P CF EY R+D YI
Sbjct: 277 EKIKKSPLTICFPEYSGRQDYHEASAYI 304
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+++G + E L+ + G + + DK + G CFV +Y R+DA
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+++G + E L+ + G + + DK + G CFV +Y R+DA
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+++G + E L+ + G + + DK + G CFV +Y R+DA
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+++G + E L+ + G + + DK + G CFV +Y R+DA
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 479
+++G + E L+ + G + + DK + G CFV +Y R+DA
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 417 DKYKKTPCGFCFVEYYAREDAENCMRYI 500
+K KK+P CF EY R+D YI
Sbjct: 277 EKIKKSPLTICFPEYSGRQDYHEASAYI 304
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 306 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 485
K + + + NL E+ I +++ G I ++ + +D ++ GF + + +DA+
Sbjct: 124 KGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENR-GFATITFRNADDAQK 182
Query: 486 CMRYINGTRLDDRIIR 533
+N L R IR
Sbjct: 183 SCEQLNNFELAGRCIR 198
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
TL I ++ T + E +S G +R V + D G C+VE++ E +
Sbjct: 26 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLA- 84
Query: 498 INGTRL 515
+NG RL
Sbjct: 85 LNGQRL 90
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 306 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 485
K + + + NL E+ I +++ G I ++ + +D ++ GF + + +DA+
Sbjct: 269 KGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENR-GFATITFRNADDAQK 327
Query: 486 CMRYINGTRLDDRIIR 533
+N L R IR
Sbjct: 328 SCEQLNNFELAGRCIR 343
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 497
TL I ++ T + E +S G +R V + D G C+VE++ E +
Sbjct: 171 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLA- 229
Query: 498 INGTRL 515
+NG RL
Sbjct: 230 LNGQRL 235
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENC 488
L++G + E+ + L+ + G I + DKY G F+ Y R+ A C
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -3
Query: 426 CICLVPLLLFLYRRIVNTVHKFVLLLCKMKGFQCKALMKLLVIFLVRFWIPAL 268
CI ++PLLL L R I+ K ++C L+ L+ + F IPAL
Sbjct: 118 CILILPLLLCLIRLIILIYPKDHPMICSKIMIISLPLLFLIPLCCTSFMIPAL 170
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENC 488
L++G + E+ + L+ + G I + DKY G F+ Y R+ A C
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
>Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical
protein K02C4.4 protein.
Length = 723
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Frame = +3
Query: 258 LRTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYK--- 428
+RT G+RS+ + + I NL+ ++ I + G +R + G + Y
Sbjct: 297 IRTLSSGARSDVDVARAIYRWITIKNLNTMIFDDSIQN-DTPMGLLRGIKYGTESYHVLF 355
Query: 429 KTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEG 563
K C + + + Y G DD R W+A F++G
Sbjct: 356 KRLCSYAGLHCVVIKGFSKSAGYQPGYSFDDHRFRNTWNAVFLDG 400
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
LY+G + + E + G I + M KY GF FV++ DAE+ +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHDL 55
Query: 501 NGTRLDDRIIR 533
+G ++ +R
Sbjct: 56 DGKTMEGSSMR 66
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
LY+G + + E + G I + M KY GF FV++ DAE+ +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHDL 55
Query: 501 NGTRLDDRIIR 533
+G ++ +R
Sbjct: 56 DGKTMEGSSMR 66
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 321 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 500
LY+G + + E + G I + M KY GF FV++ DAE+ +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHDL 55
Query: 501 NGTRLDDRIIR 533
+G ++ +R
Sbjct: 56 DGKTMEGSSMR 66
>AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and
transglutaminase domainprotein protein.
Length = 723
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Frame = +3
Query: 258 LRTREQGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYK--- 428
+RT G+RS+ + + I NL+ ++ I + G +R + G + Y
Sbjct: 297 IRTLSSGARSDVDVARAIYRWITIKNLNTMIFDDSIQN-DTPMGLLRGIKYGTESYHVLF 355
Query: 429 KTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEG 563
K C + + + Y G DD R W+A F++G
Sbjct: 356 KRLCSYAGLHCVVIKGFSKSAGYQPGYSFDDHRFRNTWNAVFLDG 400
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 309 ASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENC 488
+S+ LYI L T ++ + E+ S+ G+I +DK G+ FV++ + + A
Sbjct: 105 SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 164
Query: 489 MRYIN 503
+ +N
Sbjct: 165 VDGLN 169
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 318 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDK 422
TLY+GNL TE+ I L+++ G + + + D+
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +3
Query: 282 RSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEY 461
RS L++ N+ F E + ++ + G + V + ++ + GF FV
Sbjct: 89 RSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTM 146
Query: 462 YAREDAENCMRYINGTRLDDR 524
+DA+ NGT ++ R
Sbjct: 147 QNPDDADRARAEFNGTTIEGR 167
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +3
Query: 282 RSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEY 461
RS L++ N+ F E + ++ + G + V + ++ + GF FV
Sbjct: 89 RSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTM 146
Query: 462 YAREDAENCMRYINGTRLDDR 524
+DA+ NGT ++ R
Sbjct: 147 QNPDDADRARAEFNGTTIEGR 167
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -1
Query: 677 IWVYFLCYYFSITATPTVIVSSIFISNLA--SCFATTVLSTFNESSIPVTAN 528
I++Y L Y + +T + S F N + SCF+T S++N ++ +T++
Sbjct: 370 IFIYVLGTYVMVHSTYHSLSSKFFSENPSTRSCFSTWFSSSYNVQNLTMTSS 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,379,465
Number of Sequences: 27780
Number of extensions: 343400
Number of successful extensions: 1168
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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