Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_B23
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   2.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   5.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.8  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 178 PTYSGTIFKNISSE*SIIGRNDFCSKL 258
           PT  G      + E  ++G N+FC KL
Sbjct: 296 PTVGGGTVGRYTREPGVMGYNEFCEKL 322


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 260 PNLEQKSLRPIIDYSLEMFLKIVPEYV 180
           P  +Q    P++  ++   LK +PEY+
Sbjct: 593 PQTQQPVNLPLVGVAVSRVLKCIPEYI 619


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 6/27 (22%), Positives = 18/27 (66%)
 Frame = +2

Query: 257  WEEFEKAAEMLYLQDPINTRYSVKYSH 337
            +++ ++  + +Y+ + +NT YS+ Y +
Sbjct: 2037 YDQSKRVLKKVYVINTLNTSYSIDYEY 2063


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,224
Number of Sequences: 2352
Number of extensions: 9806
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)