Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_B20
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   3.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.4  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = -2

Query: 455 EIWESWIDTLVTPESSIASMLPRSPTWRTAELGPP*SCFSGLK*APADVQPFVLSPNSCT 276
           EIW+S   +L    S  ++   R+P    A++       + +    A   PF+L+    T
Sbjct: 229 EIWQSSESSLRPRSSQKSAPGKRTPLISRAKINTVKQTIAVIVMYIACSTPFILAQLWAT 288

Query: 275 WKPCLPLV 252
           W P  P +
Sbjct: 289 WDPQSPFI 296


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 574 QYGHQHYQWSYLAHGHPVPSH 512
           Q+ +  + W+   HGH   SH
Sbjct: 278 QHEYNSFNWTANGHGHNTSSH 298


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 447 PDLSSWT*QHHWSHFSCPC 503
           P L+  T Q H +H++C C
Sbjct: 69  PCLNGATCQDHTTHYTCHC 87


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/49 (20%), Positives = 22/49 (44%)
 Frame = +2

Query: 254 LRANTVSMCTNLVTTQTVAHQLELISTLKNKIMVVPVLLYAMSATSVTL 400
           +R + + + +NL  T+T+    +  + +K     +         TS+TL
Sbjct: 259 IRNDFIDLLSNLRKTETITDSYKFDNDIKMAAQAIAFFSAGNDTTSITL 307


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 565 GRIACGVIGLAKI*IHTFFLCWAWYY 642
           G+     + +  I +  FF+CW  YY
Sbjct: 267 GKAKVRTLKMTIIIVLVFFVCWTPYY 292


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 565 GRIACGVIGLAKI*IHTFFLCWAWYY 642
           G+     + +  I +  FF+CW  YY
Sbjct: 267 GKAKVRTLKMTIIIVLVFFVCWTPYY 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,610
Number of Sequences: 336
Number of extensions: 4565
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)